RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 UGT1A4P22310 534 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 UGT1A3P35503 534 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 UGT1A5P35504 534 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 ACTR2P61160 394 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 BNIP3Q12983 259 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 OLIG2Q13516 323 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 TMEM53Q6P2H8 277 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 LAYNQ6UX15 382 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 GPATCH1Q9BRR8 931 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 DEFB129Q9H1M3 183 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 SYBUQ9NX95 663 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 SEPT10Q9P0V9 454 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 C2CD4BA6NLJ0 364 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 ALDH1A2O94788 518 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 TFEBP19484 476 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 GP5P40197 560 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 TMED10P49755 219 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 RPL14P50914 215 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 BCAP31P51572 246 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 PSME3P61289 254 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 DPYSQ14117 519 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 ZBED5Q49AG3 693 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 ARL13AQ5H913 290 aaPredicted RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 STRA8Q7Z7C7 330 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 LPGAT1Q92604 370 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 CXorf21Q9HAI6 301 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 VPS45Q9NRW7 570 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 ZDHHC2Q9UIJ5 367 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 VPS28Q9UK41 221 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 CDYLQ9Y232 598 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 MFHAS1Q9Y4C4 1052 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 A0A087WXM4 84 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 E7ENX8 843 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 NAMPTP43490 491 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 GLRBP48167 497 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 NUMBP49757 651 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 NAGLUP54802 743 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 PDK2Q15119 407 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 FGD3Q5JSP0 725 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 NANOGP8Q6NSW7 305 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 SLC15A3Q8IY34 581 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 SNX31Q8N9S9 440 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 CNDP1Q96KN2 507 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 JPH1Q9HDC5 661 aaPredicted RBP13.28□□□□□ -0.28
TVP23A-201ENST00000299866 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
TVP23A-201ENST00000299866 HTR3EA5X5Y0 456 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 GCATO75600 419 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 BMP10O95393 424 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 NR3C2P08235 984 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 CCDC130P13994 396 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 EPHX2P34913 555 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 TUBA4AP68366 448 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.28
TVP23A-201ENST00000299866 VPS72Q15906 364 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 XKR3Q5GH77 459 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 STEAP4Q687X5 459 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 TMEM26Q6ZUK4 368 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 ILDR2Q71H61 639 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 SETD3Q86TU7 594 aaPredicted RBP13.27□□□□□ -0.28
TVP23A-201ENST00000299866 SCYL1Q96KG9 808 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 AGAP2Q99490 1192 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 NAA50Q9GZZ1 169 aaKnown RBP13.27□□□□□ -0.28
TVP23A-201ENST00000299866 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 PORCNQ9H237 461 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 HIPK3Q9H422 1215 aa13.27□□□□□ -0.28
TVP23A-201ENST00000299866 COPG1Q9Y678 874 aaKnown RBP13.27□□□□□ -0.28
TVP23A-201ENST00000299866 GRID2O43424 1007 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 AKAP10O43572 662 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
TVP23A-201ENST00000299866 CLIC3O95833 236 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 CAPNS1P04632 268 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 HDCP19113 662 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 GRIA4P48058 902 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 CD300CQ08708 224 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 TRIM25Q14258 630 aaKnown RBP13.27□□□□□ -0.29
TVP23A-201ENST00000299866 ZNF829Q3KNS6 432 aaPredicted RBP13.27□□□□□ -0.29
TVP23A-201ENST00000299866 CCDC14Q49A88 953 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 BOLA3Q53S33 107 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 ZNF667Q5HYK9 610 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 COLGALT1Q8NBJ5 622 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 FAM110BQ8TC76 370 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 HM13Q8TCT9 377 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 ARNTL2Q8WYA1 636 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 ELOVL4Q9GZR5 314 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 NMRAL1Q9HBL8 299 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 SFMBT1Q9UHJ3 866 aa13.27□□□□□ -0.29
TVP23A-201ENST00000299866 TCAF2A6NFQ2 919 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ZNF839A8K0R7 811 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TMEM233B4DJY2 109 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 C9IYK1 514 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TK2O00142 265 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms