RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TBC1D10AQ9BXI6 508 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CNGB3Q9NQW8 809 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 NDFIP2Q9NV92 336 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 FRMPD3Q5JV73 1810 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 NLRC5Q86WI3 1866 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 E9PBE3 544 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 I6L893 689 aaPredicted RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 DPYSL4O14531 572 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 PRPF4O43172 522 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 KLHL41O60662 606 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 SPAG6O75602 509 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 ITGA2BP08514 1039 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CCNB1P14635 433 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TSPAN8P19075 237 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 NMBRP28336 390 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CCR1P32246 355 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 WASHC5Q12768 1159 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 UBAP2LQ14157 1087 aaKnown RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 LPIN1Q14693 890 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 PACS1Q6VY07 963 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 BNIPLQ7Z465 357 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 PSTKQ8IV42 348 aaKnown RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 DBF4BQ8NFT6 615 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 URGCPQ8TCY9 931 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 DENND1AQ8TEH3 1009 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CERS2Q96G23 380 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 RAB3IPQ96QF0 476 aaPredicted RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TTC1Q99614 292 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 EBF4Q9BQW3 602 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 NMUR2Q9GZQ4 415 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 PNPOQ9NVS9 261 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TMEM216Q9P0N5 145 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 SLC12A4Q9UP95 1085 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 A0A096LPK6 155 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 SMAPO00193 183 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TM9SF1O15321 606 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 GCATO75600 419 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 DDHD2O94830 711 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 SOX11P35716 441 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CLNS1AP54105 237 aaKnown RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 DUSP4Q13115 394 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CHSY1Q86X52 802 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 C10orf107Q8IVU9 208 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 TTC8Q8TAM2 541 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 RSPH1Q8WYR4 309 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 CLPTM1LQ96KA5 538 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 LRRC40Q9H9A6 602 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 FBXW11Q9UKB1 542 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
PRDM9-201ENST00000296682 STARD13Q9Y3M8 1113 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
PRDM9-201ENST00000296682 FBXO21O94952 628 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 F9P00740 461 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 IL1BP01584 269 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 GSTA1P08263 222 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SP100P23497 879 aaPredicted RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 BNIP1Q12981 228 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 MPP3Q13368 585 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 UPP1Q16831 310 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 INTS6LQ5JSJ4 861 aaKnown RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 ITPRIPL1Q6GPH6 555 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 ZNF280DQ6N043 979 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 KCNMB4Q86W47 210 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 DENND6AQ8IWF6 608 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 TMEM86AQ8N2M4 240 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 BLOC1S5Q8TDH9 187 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SH3TC2Q8TF17 1288 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 MZB1Q8WU39 189 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 ELMO2Q96JJ3 720 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 FCRL3Q96P31 734 aaPredicted RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 APOBEC2Q9Y235 224 aaKnown RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 GIT1Q9Y2X7 761 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 PLLPQ9Y342 182 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 CA12O43570 354 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 ITM2AO43736 263 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 UNC5CO95185 931 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 ANP32DO95626 131 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 C1QAP02745 245 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 PDHA1P08559 390 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SPATA31D3P0C874 917 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 IRF9Q00978 393 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 FBXO48Q5FWF7 155 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 RFWD3Q6PCD5 774 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 C4orf50Q6ZRC1 276 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SPATA31D4Q6ZUB0 917 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 C14orf80Q86SX3 495 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 FTHL17Q9BXU8 183 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 NMUR1Q9HB89 426 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 GMIPQ9P107 970 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 RUVBL2Q9Y230 463 aaKnown RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 HAS3O00219 553 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 DNAJC8O75937 253 aaPredicted RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 PRKCGP05129 697 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SPRP35270 261 aaPredicted RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 PGM1P36871 562 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SCNN1AP37088 669 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 CCR10P46092 362 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms