RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ARIH2O95376 493 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 SMIM18P0DKX4 95 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 ATICP31939 592 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 MAGEA3P43357 314 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 HARS2P49590 506 aaKnown RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 DBN1Q16643 649 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 ARL13AQ5H913 290 aaPredicted RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 USP33Q8TEY7 942 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 PRMT7Q9NVM4 692 aaPredicted RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 VILLO15195 856 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 RPL14P50914 215 aaKnown RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 TNFAIP2Q03169 654 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 MAP7D1Q3KQU3 841 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 CATSPER1Q8NEC5 780 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 ACE2Q9BYF1 805 aaPredicted RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 MRPS26Q9BYN8 205 aaKnown RBP15.01□□□□□ -0.01
CCNF-201ENST00000293968 LRRC40Q9H9A6 602 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 EFCAB1Q9HAE3 211 aa15.01□□□□□ -0.01
CCNF-201ENST00000293968 A0A1B0GTW7 788 aa15□□□□□ -0.01
CCNF-201ENST00000293968 TMEM233B4DJY2 109 aa15□□□□□ -0.01
CCNF-201ENST00000293968 HMGB2P26583 209 aaKnown RBP15□□□□□ -0.01
CCNF-201ENST00000293968 CDKL1Q00532 357 aa15□□□□□ -0.01
CCNF-201ENST00000293968 GRM2Q14416 872 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ZNF567Q8N184 647 aa15□□□□□ -0.01
CCNF-201ENST00000293968 DNERQ8NFT8 737 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ARNTL2Q8WYA1 636 aa15□□□□□ -0.01
CCNF-201ENST00000293968 FZD8Q9H461 694 aa15□□□□□ -0.01
CCNF-201ENST00000293968 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15□□□□□ -0.01
CCNF-201ENST00000293968 HDAC3O15379 428 aa15□□□□□ -0.01
CCNF-201ENST00000293968 STAMBPO95630 424 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ADARP55265 1226 aaKnown RBP15□□□□□ -0.01
CCNF-201ENST00000293968 POU5F1BQ06416 359 aa15□□□□□ -0.01
CCNF-201ENST00000293968 PPIDQ08752 370 aaKnown RBP15□□□□□ -0.01
CCNF-201ENST00000293968 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
CCNF-201ENST00000293968 CEACAM7Q14002 265 aa15□□□□□ -0.01
CCNF-201ENST00000293968 TMEM259Q4ZIN3 620 aa15□□□□□ -0.01
CCNF-201ENST00000293968 GJC2Q5T442 439 aaPredicted RBP15□□□□□ -0.01
CCNF-201ENST00000293968 DEFB106AQ8N104 65 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ACVR1CQ8NER5 493 aa15□□□□□ -0.01
CCNF-201ENST00000293968 KCTD4Q8WVF5 259 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ATP6V1E2Q96A05 226 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ZFRQ96KR1 1074 aaKnown RBP15□□□□□ -0.01
CCNF-201ENST00000293968 APBA2Q99767 749 aa15□□□□□ -0.01
CCNF-201ENST00000293968 PCDHAC1Q9H158 963 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ARHGEF37A1IGU5 675 aa15□□□□□ -0.01
CCNF-201ENST00000293968 IRF6O14896 467 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ICAM3P32942 547 aa15□□□□□ -0.01
CCNF-201ENST00000293968 SOX11P35716 441 aa15□□□□□ -0.01
CCNF-201ENST00000293968 MYBPC1Q00872 1141 aa15□□□□□ -0.01
CCNF-201ENST00000293968 ZNF460Q14592 562 aa15□□□□□ -0.01
CCNF-201ENST00000293968 DGKDQ16760 1214 aa15□□□□□ -0.01
CCNF-201ENST00000293968 KCNMB4Q86W47 210 aa15□□□□□ -0.01
CCNF-201ENST00000293968 RBBP8Q99708 897 aa15□□□□□ -0.01
CCNF-201ENST00000293968 PTPRHQ9HD43 1115 aa15□□□□□ -0.01
CCNF-201ENST00000293968 HEMK1Q9Y5R4 338 aaPredicted RBP15□□□□□ -0.01
CCNF-201ENST00000293968 ZNF195O14628 629 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 TFEBP19484 476 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 MAGEA6P43360 314 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 RALGDSQ12967 914 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 DPYSL2Q16555 572 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 TMEM79Q9BSE2 394 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 CYP4F12Q9HCS2 524 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 CHRAC1Q9NRG0 131 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 PHF24Q9UPV7 400 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 SOWAHBA6NEL2 793 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 EEF2KO00418 725 aaKnown RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 ARF4P18085 180 aaPredicted RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 ACAT1P24752 427 aaKnown RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 PPARGP37231 505 aaPredicted RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 INSCQ1MX18 579 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 GK5Q6ZS86 529 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 MYO1HQ8N1T3 1032 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 MARVELD2Q8N4S9 558 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 DIS3LQ8TF46 1054 aaKnown RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 PPP1R13LQ8WUF5 828 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 ZNF711Q9Y462 761 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 M0QYT0 321 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 GPC4O75487 556 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 VAPBO95292 243 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 PRKCGP05129 697 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 TXNP10599 105 aaKnown RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 LRRC8EQ6NSJ5 796 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 VPS39Q96JC1 886 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 NAT9Q9BTE0 207 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 THEGQ9P2T0 379 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 RAB26Q9ULW5 256 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 IGKV6D-21A0A0A0MT36 114 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 FBXO21O94952 628 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 PITX1P78337 314 aaPredicted RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 SPANXN3Q5MJ09 141 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 STXBP5Q5T5C0 1151 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 LILRA2Q8N149 483 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 TSPAN14Q8NG11 270 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 RP9Q8TA86 221 aaKnown RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 GPR20Q99678 358 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 CHCHD3Q9NX63 227 aaKnown RBP14.99□□□□□ -0.01
CCNF-201ENST00000293968 ZDHHC2Q9UIJ5 367 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 KIAA1257Q9ULG3 409 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 PRPF19Q9UMS4 504 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms