RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GDAP2Q9NXN4 497 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 IGSF9Q9P2J2 1179 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SPATA31D1Q6ZQQ2 1576 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MED12Q93074 2177 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MON2Q7Z3U7 1717 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 HEATR9A2RTY3 570 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ENTPD3O75355 529 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CCNE2O96020 404 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 QPRTQ15274 297 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SAMD4BQ5PRF9 694 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 ATF7IP2Q5U623 682 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CAMK1DQ8IU85 385 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 IPMKQ8NFU5 416 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 OR8H1Q8NGG4 311 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 PIK3R3Q92569 461 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MRPL48Q96GC5 212 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 VPS35Q96QK1 796 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 KCTD14Q9BQ13 255 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 CINPQ9BW66 212 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 SIK2Q9H0K1 926 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 IL1RL2Q9HB29 575 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 BCS1LQ9Y276 419 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ISPDA4D126 451 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 EEF2KO00418 725 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 YES1P07947 543 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MMP10P09238 476 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 RASA1P20936 1047 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 PSMB9P28065 219 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 GRIK1P39086 918 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 GDI2P50395 445 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 DRG2P55039 364 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 PURAQ00577 322 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 SQLEQ14534 574 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 EPC2Q52LR7 807 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 DCAF6Q58WW2 860 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MRNIPQ6NTE8 343 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 LLGL2Q6P1M3 1020 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ZNF571Q7Z3V5 609 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 SP8Q8IXZ3 490 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 EDARQ9UNE0 448 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CACNB3P54284 484 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 NADK2Q4G0N4 442 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 PDZK1Q5T2W1 519 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 EMC10Q5UCC4 262 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CENPLQ8N0S6 344 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 SVOPQ8N4V2 548 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 FBXO36Q8NEA4 188 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 DNAJB4Q9UDY4 337 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CEMIPQ8WUJ3 1361 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ZDBF2Q9HCK1 2354 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SHPRHQ149N8 1683 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 BTNL10A8MVZ5 291 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TK2O00142 265 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ICMTO60725 284 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 VPS26AO75436 327 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CD44P16070 742 aaKnown RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 SLC1A6P48664 564 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 RGS7P49802 495 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MGAT5Q09328 741 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 CYP51A1Q16850 503 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 MYLK3Q32MK0 819 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 BIRC8Q96P09 236 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 PRR12Q9ULL5 1215 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 C19orf81C9J6K1 198 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TWF1Q12792 350 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 GOLGA7BQ2TAP0 167 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 DGLUCYQ7Z3D6 616 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SPATA2LQ8IUW3 424 aaPredicted RBP5.8□□□□□ -1.48
VCAN-201ENST00000265077 FITM2Q8N6M3 262 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 TCP10LQ8TDR4 215 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 RAB2BQ8WUD1 216 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ERAP1Q9NZ08 941 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 ARMCX1Q9P291 453 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 SNX9Q9Y5X1 595 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 V9GYQ6 96 aa5.8□□□□□ -1.48
VCAN-201ENST00000265077 RNF103O00237 685 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 PRPF4O43172 522 aaKnown RBP eCLIP5.79□□□□□ -1.48
VCAN-201ENST00000265077 HBP1O60381 514 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 GJB6O95452 261 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 AQP5P55064 265 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 ITGA1P56199 1179 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 DENND5AQ6IQ26 1287 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 FRMD7Q6ZUT3 714 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 GANQ9H2C0 597 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 STN1Q9H668 368 aaKnown RBP5.79□□□□□ -1.48
VCAN-201ENST00000265077 EHD3Q9NZN3 535 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 CD274Q9NZQ7 290 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 DNAJC16Q9Y2G8 782 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 WASF2Q9Y6W5 498 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 AHCTF1Q8WYP5 2266 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 KIAA1217Q5T5P2 1943 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 AKAP11Q9UKA4 1901 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 NUP98P52948 1817 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 DIP2BQ9P265 1576 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 NR5A2O00482 541 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 ETV3P41162 512 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 CDK9P50750 372 aaKnown RBP5.79□□□□□ -1.48
VCAN-201ENST00000265077 AQP4P55087 323 aa5.79□□□□□ -1.48
VCAN-201ENST00000265077 TSNQ15631 228 aaKnown RBP5.79□□□□□ -1.48
VCAN-201ENST00000265077 DDR2Q16832 855 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms