RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 RABGAP1LQ5R372 815 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 FAM72AQ5TYM5 149 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 MANEALQ5VSG8 457 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 FAM72DQ6L9T8 149 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 Q6ZS52 159 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 POLNQ7Z5Q5 900 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 FAM72BQ86X60 149 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 PYROXD2Q8N2H3 581 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 CARNMT1Q8N4J0 409 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 LMLNQ96KR4 655 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 SLC2A11Q9BYW1 496 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 DDX56Q9NY93 547 aaKnown RBP11.91□□□□□ -0.5
PFDN1-201ENST00000261813 SNX12Q9UMY4 172 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 NEU3Q9UQ49 428 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 PCDHA3Q9Y5H8 950 aa11.91□□□□□ -0.5
PFDN1-201ENST00000261813 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 DRGXA6NNA5 263 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 PRRT4C9JH25 899 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 NCAM2O15394 837 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 PRPSAP2O60256 369 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 SRGAP2O75044 1071 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 URI1O94763 535 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 FTCDO95954 541 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 IL1R2P27930 398 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 CD70P32970 193 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 CTNNA1P35221 906 aaKnown RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 AIF1P55008 147 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 RWDD2BP57060 319 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 SLC25A11Q02978 314 aaKnown RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 SEMA3BQ13214 749 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 LRRC32Q14392 662 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 QPCTQ16769 361 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 BOLA3Q53S33 107 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 ALFQ53S48 1182 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 EFHC2Q5JST6 749 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 DGKKQ5KSL6 1271 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 ACBD5Q5T8D3 534 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 TXNRD3NBQ6F5E7 133 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 MFN1Q8IWA4 741 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 NAP1L3Q99457 506 aaPredicted RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 SNRNP25Q9BV90 132 aaKnown RBP11.9□□□□□ -0.5
PFDN1-201ENST00000261813 TLR10Q9BXR5 811 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 CARD9Q9H257 536 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 OR12D3Q9UGF7 316 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 HCN2Q9UL51 889 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 USP18Q9UMW8 372 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 AP4E1Q9UPM8 1137 aa11.9□□□□□ -0.5
PFDN1-201ENST00000261813 TBC1D3BA6NDS4 549 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 H0Y626 953 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 H0Y858 1186 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ENC1O14682 589 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 GDF9O60383 454 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 LRIG2O94898 1065 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 L1CAMP32004 1257 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 PAFAH1B1P43034 410 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 SSR1P43307 286 aaKnown RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CDH4P55283 916 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 SEC13P55735 322 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 TUBB4BP68371 445 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 LMAN2Q12907 356 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CDH18Q13634 790 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 WHAMMP3Q1A5X7 153 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 KCNT1Q5JUK3 1230 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ERMARDQ5T6L9 678 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 TMEM215Q68D42 235 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 PKN3Q6P5Z2 889 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CHST9Q7L1S5 443 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ANKS1BQ7Z6G8 1248 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 KIAA0907Q7Z7F0 614 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 PSTKQ8IV42 348 aaKnown RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 SYNPOQ8N3V7 929 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 OR52K2Q8NGK3 314 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 FIBINQ8TAL6 211 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CHRDQ9H2X0 955 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ZWILCHQ9H900 591 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ABCB8Q9NUT2 735 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 MPP6Q9NZW5 540 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ZNF212Q9UDV6 495 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 CDC23Q9UJX2 597 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 GGA2Q9UJY4 613 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
PFDN1-201ENST00000261813 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-201ENST00000261813 KCNK3O14649 394 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms