RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SPON2Q9BUD6 331 aa19.23■□□□□ 0.67
CYSTM1-201ENST00000261811 FBRSQ9HAH7 460 aa19.23■□□□□ 0.67
CYSTM1-201ENST00000261811 ATP13A1Q9HD20 1204 aa19.23■□□□□ 0.67
CYSTM1-201ENST00000261811 ZDHHC4Q9NPG8 344 aa19.23■□□□□ 0.67
CYSTM1-201ENST00000261811 ZSCAN32Q9NX65 697 aa19.23■□□□□ 0.67
CYSTM1-201ENST00000261811 RCOR3Q9P2K3 495 aaPredicted RBP19.23■□□□□ 0.67
CYSTM1-201ENST00000261811 K7ESF4 209 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 ADAM23O75077 832 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 IL1R2P27930 398 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 GJC1P36383 396 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 IL12RB1P42701 662 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 SLC20A2Q08357 652 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 ENPP2Q13822 863 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 POLD3Q15054 466 aaPredicted RBP19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 PDK2Q15119 407 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 TSSK4Q6SA08 328 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 RFX8Q6ZV50 586 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 LONP2Q86WA8 852 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 MAML2Q8IZL2 1156 aaPredicted RBP19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 DCAF4L2Q8NA75 395 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 ACRBPQ8NEB7 543 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 HHIPQ96QV1 700 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 KCTD15Q96SI1 283 aaPredicted RBP19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 EBF1Q9UH73 591 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 PCDHGA2Q9Y5H1 932 aa19.22■□□□□ 0.67
CYSTM1-201ENST00000261811 SPAG17Q6Q759 2223 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 CEP192Q8TEP8 1941 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 PLXND1Q9Y4D7 1925 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 SHROOM3Q8TF72 1996 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 CXorf51AA0A1B0GTR3 108 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 TCRBV21S2A2A0A5A6 115 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 PJA2O43164 708 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 PTMAP06454 111 aaKnown RBP19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 GOT1P17174 413 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 CNR2P34972 360 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 VASPP50552 380 aaPredicted RBP19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 CDH6P55285 790 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 TCF15Q12870 199 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 BYSLQ13895 437 aaKnown RBP19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 CA9Q16790 459 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 PTPRNQ16849 979 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 PARP15Q460N3 678 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 CYP4V2Q6ZWL3 525 aaPredicted RBP19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 RHOT1Q8IXI2 618 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 LZTR1Q8N653 840 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 TSGA10Q9BZW7 698 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 TMEM245Q9H330 911 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 DDX56Q9NY93 547 aaKnown RBP19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 ZNF212Q9UDV6 495 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 HCN2Q9UL51 889 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 OR51B4Q9Y5P0 310 aa19.21■□□□□ 0.67
CYSTM1-201ENST00000261811 ZSCAN5CA6NGD5 496 aaPredicted RBP19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 WASH3PC4AMC7 463 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 CBX4O00257 560 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 AXIN1O15169 862 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 CHRM1P11229 460 aaPredicted RBP19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 NDST2P52849 883 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 ACCSLQ4AC99 568 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 LRRC38Q5VT99 294 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 HEATR6Q6AI08 1181 aaKnown RBP19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 ANO7Q6IWH7 933 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 C11orf63Q6NUN7 778 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 TMEM92Q6UXU6 159 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 DAAM2Q86T65 1068 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 METTL3Q86U44 580 aaKnown RBP19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 WDR5BQ86VZ2 330 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 UMODL1-AS1Q8N2C9 162 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 HMGB4Q8WW32 186 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 ALG14Q96F25 216 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 CCDC114Q96M63 670 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 CALN1Q9BXU9 219 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 C2orf42Q9NWW7 574 aa19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 CWC15Q9P013 229 aaKnown RBP19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 FARP1Q9Y4F1 1045 aaPredicted RBP19.2■□□□□ 0.66
CYSTM1-201ENST00000261811 A0A0D9SEW6 157 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 EDDM13A0A1B0GTR0 161 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 TARSL2A2RTX5 802 aaKnown RBP19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 ANTXRLA6NF34 631 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 ARHGAP42A6NI28 874 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 RNASEH1O60930 286 aaKnown RBP19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 TCF4P15884 667 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 ERCC2P18074 760 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 PRKCHP24723 683 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 SERPINB6P35237 376 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 CLCN6P51797 869 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 USP39Q53GS9 565 aaKnown RBP19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 ATP11CQ8NB49 1132 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 OR7D4Q8NG98 312 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 OR52K2Q8NGK3 314 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 ARHGEF2Q92974 986 aaKnown RBP19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 RPL10LQ96L21 214 aaKnown RBP19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 PCDH18Q9HCL0 1135 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 VPS51Q9UID3 782 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 NEU3Q9UQ49 428 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 RAD54BQ9Y620 910 aa19.19■□□□□ 0.66
CYSTM1-201ENST00000261811 A0A1W2PQF6 199 aa19.18■□□□□ 0.66
CYSTM1-201ENST00000261811 KRT86O43790 486 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms