RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ZNF567Q8N184 647 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ICA1LQ8NDH6 482 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 USP33Q8TEY7 942 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ZNF296Q8WUU4 475 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 SGF29Q96ES7 293 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 FCRL3Q96P31 734 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CENPKQ9BS16 269 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 NUF2Q9BZD4 464 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 SNX25Q9H3E2 840 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ARHGAP26Q9UNA1 814 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 INPP5FQ9Y2H2 1132 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 TRIM17Q9Y577 477 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 PGAM1P18669 254 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 NR2C2P49116 596 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 SNX16P57768 344 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 LAMC2Q13753 1193 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 GSTA3Q16772 222 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 LIN52Q52LA3 116 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 TMEM198Q66K66 360 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CTU1Q7Z7A3 348 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 SNX32Q86XE0 403 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CCNYL1Q8N7R7 359 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ACVR1CQ8NER5 493 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 GTF3C2Q8WUA4 911 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CDRT15Q96T59 188 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 EIF2AQ9BY44 585 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 CDH23Q9H251 3354 aa14.79□□□□□ -0.04
SFSWAP-201ENST00000261674 ZSWIM8A7E2V4 1837 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 UNCXA6NJT0 531 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 ZNF865P0CJ78 1059 aaPredicted RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 GRK2P25098 689 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 MPSTP25325 297 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 CNTFP26441 200 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 FDFT1P37268 417 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 RAB27AP51159 221 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 CACNB2Q08289 660 aaPredicted RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 FSTL4Q6MZW2 842 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 IYDQ6PHW0 289 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 TDRD5Q8NAT2 981 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 RNF139Q8WU17 664 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 KCNN1Q92952 543 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 AP5M1Q9H0R1 490 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 TASP1Q9H6P5 420 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 IARS2Q9NSE4 1012 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 C20orf96Q9NUD7 363 aaPredicted RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 BFARQ9NZS9 450 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 MYOCOSA0A1B0GUC4 107 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 MMP3P08254 477 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 KLF10Q13118 480 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 PDCD2Q16342 344 aaPredicted RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 SATL1Q86VE3 508 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 TRAPPC9Q96Q05 1148 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 C1orf21Q9H246 121 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 GPAMQ9HCL2 828 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 VTA1Q9NP79 307 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 TCF7L2Q9NQB0 619 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 LCTP09848 1927 aa14.78□□□□□ -0.04
SFSWAP-201ENST00000261674 TSPAN1O60635 241 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 IL31Q6EBC2 164 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 LRRC8BQ6P9F7 803 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 FAM156AQ8NDB6 213 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 APBB2Q92870 758 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 IFT43Q96FT9 208 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 CATSPER2Q96P56 530 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 MED10Q9BTT4 135 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 CDHR5Q9HBB8 845 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 CHRAC1Q9NRG0 131 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 APPL1Q9UKG1 709 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 STX16-NPEPL1H3BU86 382 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 TK2O00142 265 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 C2P06681 752 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 SPRP35270 261 aaPredicted RBP14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 NAGLUP54802 743 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 BTKQ06187 659 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 PDK3Q15120 406 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 FSCBQ5H9T9 825 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 PTAR1Q7Z6K3 402 aaPredicted RBP14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 PIGZQ86VD9 579 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 PDSS2Q86YH6 399 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 FBXW8Q8N3Y1 598 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 RAB3IL1Q8TBN0 382 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 TMA16Q96EY4 203 aaKnown RBP14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 APBA2Q99767 749 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 C16orf70Q9BSU1 422 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 LRRC4Q9HBW1 653 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 CACNG4Q9UBN1 327 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 DTNAQ9Y4J8 743 aa14.77□□□□□ -0.04
SFSWAP-201ENST00000261674 MGAMO43451 1857 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 EEF2KO00418 725 aaKnown RBP14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 UQCRBP14927 111 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 MAGEA6P43360 314 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 FOLH1Q04609 750 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 NIPAL4Q0D2K0 466 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 BST2Q10589 180 aaKnown RBP14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 CNGA3Q16281 694 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms