RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NUP62P37198 522 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 NR2C2P49116 596 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ATP1A4Q13733 1029 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 GLIS3Q8NEA6 775 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 OR52K1Q8NGK4 314 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 OR6Y1Q8NGX8 325 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 KAT5Q92993 513 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 RNFT2Q96EX2 444 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 FBXO6Q9NRD1 293 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 L1RE1Q9UN81 338 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 PPIEQ9UNP9 301 aaKnown RBP12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ARHGAP23Q9P227 1491 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 TRIM13O60858 407 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 COX7A2P14406 83 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 GPR15P49685 360 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 MAPK11Q15759 364 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 ARMC12Q5T9G4 340 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 DDI2Q5TDH0 399 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 NT5DC4Q86YG4 428 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 FAM126BQ8IXS8 530 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 TMEM132CQ8N3T6 1108 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 LPPQ93052 612 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 PHACTR1Q9C0D0 580 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 TRIM17Q9Y577 477 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 DCXO43602 365 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 XRCC4Q13426 336 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 C11orf88Q6PI97 169 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 PRR23CQ6ZRP0 262 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 MCOLN3Q8TDD5 553 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 THAP1Q9NVV9 213 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 VTI1BQ9UEU0 232 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 TRHDEQ9UKU6 1024 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
COL8A1-201ENST00000261037 A0A087X1B8 175 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 LPCAT2Q7L5N7 544 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF410Q86VK4 478 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF75CPQ92670 426 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 PRRG3Q9BZD7 231 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ARHGEF3Q9NR81 526 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ARL15Q9NXU5 204 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 POLR1DQ9Y2S0 133 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 NWD1Q149M9 1564 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 NFKB1P19838 968 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 HPCAL1P37235 193 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 WDR59Q6PJI9 974 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 RBM43Q6ZSC3 357 aaKnown RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 SENP8Q96LD8 212 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 CDRT15Q96T59 188 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ARMC7Q9H6L4 198 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ADAM30Q9UKF2 790 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 A0A0U1RQJ8 604 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 CHURC1-FNTBB4DL54 471 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 TRIM32Q13049 653 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ZC3H12AQ5D1E8 599 aaKnown RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 DCUN1D5Q9BTE7 237 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 MRPL39Q9NYK5 338 aaKnown RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 KLHL3Q9UH77 587 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 RGS14O43566 566 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 TBC1D12O60347 775 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 PAEPP09466 180 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 TGFB3P10600 412 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 KDELR1P24390 212 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ABL2P42684 1182 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 MAGEA10P43363 369 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 CASP5P51878 434 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 SDHAF4Q5VUM1 108 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF57Q68EA5 555 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 NEK10Q6ZWH5 1172 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 RNF44Q7L0R7 432 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 KRT77Q7Z794 578 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 STK32CQ86UX6 486 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 NETO2Q8NC67 525 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
COL8A1-201ENST00000261037 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 ADPRHL2Q9NX46 363 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 OPTCQ9UBM4 332 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 DAPK2Q9UIK4 370 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 NCKAP1Q9Y2A7 1128 aa12.29□□□□□ -0.44
COL8A1-201ENST00000261037 FKBP6O75344 327 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ADRB2P07550 413 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ADRA1DP25100 572 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 TNFSF9P41273 254 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 SERPINH1P50454 418 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 GCNT1Q02742 428 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 VGLL4Q14135 290 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 DENND1CQ8IV53 801 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MAP4K3Q8IVH8 894 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PCDH20Q8N6Y1 951 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MPP4Q96JB8 637 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms