RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 APBA2Q99767 749 aa13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 EBNA1BP2Q99848 306 aaKnown RBP13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 MXRA8Q9BRK3 442 aa13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 OSBPL10Q9BXB5 764 aa13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 DCDC2Q9UHG0 476 aa13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 CNOT6Q9ULM6 557 aaKnown RBP13.57□□□□□ -0.24
TUBGCP4-201ENST00000260383 TCAF2A6NFQ2 919 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 E7ENX8 843 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 PSMD11O00231 422 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 CLPXO76031 633 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 IL18RAPO95256 599 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 BCL10O95999 233 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 JUNP05412 331 aaKnown RBP13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 PTPN2P17706 415 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 HPCAL1P37235 193 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 NLRP11P59045 1033 aaKnown RBP13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 CRADDP78560 199 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 SPP2Q13103 211 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 TRPC3Q13507 836 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 NOMO1Q15155 1222 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 TREML2Q5T2D2 321 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 PLD6Q8N2A8 252 aaKnown RBP13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 GPD1LQ8N335 351 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 CSF3RQ99062 836 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 EFCAB1Q9HAE3 211 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 GCATO75600 419 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 KRT7P08729 469 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 MYF6P23409 242 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 RBL1P28749 1068 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 LIG4P49917 911 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 INAVAQ3KP66 663 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 CMC1Q7Z7K0 106 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 CBR4Q8N4T8 237 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 GABPB2Q8TAK5 448 aaPredicted RBP13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 SLC7A3Q8WY07 619 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 BSNDQ8WZ55 320 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 MOCS1Q9NZB8 636 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 GMPR2Q9P2T1 348 aaKnown RBP13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 KLQ9UEF7 1012 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 FZD1Q9UP38 647 aa13.56□□□□□ -0.24
TUBGCP4-201ENST00000260383 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 POLR2BP30876 1174 aaKnown RBP13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 ADAM17P78536 824 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 CARTPTQ16568 116 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 RAB6CQ53S08 254 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 ZNF354CQ86Y25 554 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 ADI1Q9BV57 179 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 RAB6CQ9H0N0 254 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 CYP26B1Q9NR63 512 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PIH1D1Q9NWS0 290 aaKnown RBP13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PAK5Q9P286 719 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PCDHGA7Q9Y5G6 932 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PCDHAC2Q9Y5I4 1007 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 FAM149AA5PLN7 773 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 STAM2O75886 525 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PTPN9P43378 593 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 CSE1LP55060 971 aaKnown RBP13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 UGCGQ16739 394 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 GPAT2Q6NUI2 795 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 USP43Q70EL4 1123 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PIWIL3Q7Z3Z3 882 aaKnown RBP13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 USP37Q86T82 979 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 TNIP2Q8NFZ5 429 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 SDCBP2Q9H190 292 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 SMARCAD1Q9H4L7 1026 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 PCDH12Q9NPG4 1184 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 ARHGAP28Q9P2N2 729 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 TCAF1Q9Y4C2 921 aa13.55□□□□□ -0.24
TUBGCP4-201ENST00000260383 ZNF839A8K0R7 811 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 KCNU1A8MYU2 1149 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 HNRNPDLO14979 420 aaKnown RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 METTL18O95568 372 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 NDUFB10O96000 172 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 LTFP02788 710 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 SLC7A1P30825 629 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 TTKP33981 857 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 ACOT2P49753 483 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 PSME3P61289 254 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 MERTKQ12866 999 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 AGAP7PQ5VUJ5 663 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 PQLC3Q8N755 202 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 BPIFB6Q8NFQ5 453 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 ACMSDQ8TDX5 336 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 CAPSLQ8WWF8 208 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 SH3YL1Q96HL8 342 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 SOX17Q9H6I2 414 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 PCDHGC3Q9UN70 934 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 IFT52Q9Y366 437 aa13.54□□□□□ -0.24
TUBGCP4-201ENST00000260383 HES2Q9Y543 173 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms