RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 TBL1XO60907 577 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 RNGTTO60942 597 aaKnown RBP12.38□□□□□ -0.43
RFPL3-201ENST00000249007 LATS1O95835 1130 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 BMP15O95972 392 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 HOXD13P35453 343 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 YWHAGP61981 247 aaKnown RBP eCLIP12.38□□□□□ -0.43
RFPL3-201ENST00000249007 CYP4F2P78329 520 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
RFPL3-201ENST00000249007 NCAPHQ15003 741 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 MANEAQ5SRI9 462 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 ADNPQ9H2P0 1102 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 SEPT10Q9P0V9 454 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 ACSL6Q9UKU0 697 aa12.38□□□□□ -0.43
RFPL3-201ENST00000249007 INTS6Q9UL03 887 aaKnown RBP12.38□□□□□ -0.43
RFPL3-201ENST00000249007 HBS1LQ9Y450 684 aaKnown RBP12.38□□□□□ -0.43
RFPL3-201ENST00000249007 ZFC3H1O60293 1989 aaKnown RBP12.38□□□□□ -0.43
RFPL3-201ENST00000249007 NYNRINQ9P2P1 1898 aaKnown RBP12.37□□□□□ -0.43
RFPL3-201ENST00000249007 SLC31A1O15431 190 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 LIPCP11150 499 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 PRLRP16471 622 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 CASP4P49662 377 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 PDX1P52945 283 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 METAP1P53582 386 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
RFPL3-201ENST00000249007 NUCB2P80303 420 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 MORC3Q14149 939 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 ZNF542PQ5EBM4 170 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 PIK3R6Q5UE93 754 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 RFWD3Q6PCD5 774 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 DSG4Q86SJ6 1040 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 VASH2Q86V25 355 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 OR13H1Q8NG92 308 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 HTR3CQ8WXA8 447 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 FAM131CQ96AQ9 280 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 IFT43Q96FT9 208 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 LMLNQ96KR4 655 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 TWNKQ96RR1 684 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 FUCA2Q9BTY2 467 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 DUSP16Q9BY84 665 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 OLA1Q9NTK5 396 aaKnown RBP12.37□□□□□ -0.43
RFPL3-201ENST00000249007 DNAJC28Q9NX36 388 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 STIM2Q9P246 746 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 SLCO3A1Q9UIG8 710 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 ERVW-1Q9UQF0 538 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 CEP83Q9Y592 693 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 ITIH6Q6UXX5 1313 aa12.37□□□□□ -0.43
RFPL3-201ENST00000249007 PRRC2CQ9Y520 2896 aaKnown RBP12.37□□□□□ -0.43
RFPL3-201ENST00000249007 EME2A4GXA9 379 aaPredicted RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 CLIC2O15247 247 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 SRPRAP08240 638 aaKnown RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 ASPAP45381 313 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 SPIDRQ14159 915 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 TERF2Q15554 542 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 RNF219Q5W0B1 726 aaPredicted RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 CCDC65Q8IXS2 484 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 ZNF548Q8NEK5 533 aaPredicted RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 WDR48Q8TAF3 677 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 FIBINQ8TAL6 211 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 PTPRN2Q92932 1015 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 ZSCAN31Q96LW9 406 aaPredicted RBP12.36□□□□□ -0.43
RFPL3-201ENST00000249007 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 ANAPC2Q9UJX6 822 aa12.36□□□□□ -0.43
RFPL3-201ENST00000249007 MUSKO15146 869 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 VNN1O95497 513 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 UGT1A5P35504 534 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 AP3M2P53677 418 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 ECT2LQ008S8 904 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 EIF3IQ13347 325 aaKnown RBP12.35□□□□□ -0.43
RFPL3-201ENST00000249007 CDH18Q13634 790 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 DRAP1Q14919 205 aaPredicted RBP12.35□□□□□ -0.43
RFPL3-201ENST00000249007 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 PITRM1Q5JRX3 1037 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 AGBL4Q5VU57 503 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 RAB11FIP2Q7L804 512 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 SLC22A18ASQ8N1D0 253 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 FBXO39Q8N4B4 442 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 RNF139Q8WU17 664 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 SPAG5Q96R06 1193 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 SFMBT1Q9UHJ3 866 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 PLAAQ9Y263 795 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 LRRK1Q38SD2 2015 aa12.35□□□□□ -0.43
RFPL3-201ENST00000249007 H3BQV1 296 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 CASC3O15234 703 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 IRAK2O43187 625 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 MSI1O43347 362 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 WT1P19544 449 aaPredicted RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 AKT2P31751 481 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 TXLNAP40222 546 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 INCA1Q0VD86 236 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 CNTN1Q12860 1018 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms