RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SMOC2Q9H3U7 446 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 PRKAG3Q9UGI9 489 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 SNX10Q9Y5X0 201 aa17.41■□□□□ 0.38
CDKN1A-201ENST00000244741 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 UBOX5O94941 541 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 ASMTLO95671 621 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 APOC2P02655 101 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 IRF1P10914 325 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 DESP17661 470 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 KRT15P19012 456 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 HOXA9P31269 272 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 ATP5C1P36542 298 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 NRLP54845 237 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 EIF3EP60228 445 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 MMRN1Q13201 1228 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 SYCE2Q6PIF2 218 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 OVCA2Q8WZ82 227 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 WDR83Q9BRX9 315 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 TRIM62Q9BVG3 475 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 SFXN1Q9H9B4 322 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 XPO7Q9UIA9 1087 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 IRAK2O43187 625 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 MOSPD3O75425 235 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 SSTR1P30872 391 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 PCK1P35558 622 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 KCNQ1P51787 676 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 ARL4CP56559 192 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 IL9RQ01113 521 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 ACAP1Q15027 740 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 POTEHQ6S545 545 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 NPNTQ6UXI9 565 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 BNIPLQ7Z465 357 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 C4orf33Q8N1A6 199 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 MYLIPQ8WY64 445 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 MRPS31Q92665 395 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 SNRNP25Q9BV90 132 aaKnown RBP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 TKTL2Q9H0I9 626 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 WDCPQ9H6R7 721 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 CLEC1BQ9P126 229 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 RABGEF1Q9UJ41 708 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 ARL2BPQ9Y2Y0 163 aa17.4■□□□□ 0.38
CDKN1A-201ENST00000244741 A0A1W2PPM1 405 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 PRPF4O43172 522 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 TBX10O75333 385 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 TMEM63AO94886 807 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 IGLV3-25P01717 112 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 HDCP19113 662 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 MNAT1P51948 309 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 ADAM15Q13444 863 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 MTM1Q13496 603 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 EFHC2Q5JST6 749 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 SNX30Q5VWJ9 437 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 ELMSAN1Q6PJG2 1045 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 BEND5Q7L4P6 421 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 PYROXD1Q8WU10 500 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 GCNAQ96QF7 691 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 SLC46A2Q9BY10 475 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 SLC24A2Q9UI40 661 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 DNMT3LQ9UJW3 386 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 C2orf16Q68DN1 1984 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 OBSL1O75147 1896 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 TMEM265A0A087WTH1 108 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 PIAS1O75925 651 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 ENDOD1O94919 500 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 C1RP00736 705 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 RBP3P10745 1247 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 MBL2P11226 248 aaPredicted RBP17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 ZXDBP98169 803 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 EFTUD2Q15029 972 aaKnown RBP eCLIP17.39■□□□□ 0.377e-7■■□□□ 11.7
CDKN1A-201ENST00000244741 GALNTL6Q49A17 601 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 PPP6R3Q5H9R7 873 aaPredicted RBP17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 GPR158Q5T848 1215 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 ANKRD54Q6NXT1 300 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 PARP9Q8IXQ6 854 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 WBP2Q969T9 261 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 ZSWIM3Q96MP5 696 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 RRN3Q9NYV6 651 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 PSMC3IPQ9P2W1 217 aaPredicted RBP17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 GRID1Q9ULK0 1009 aa17.39■□□□□ 0.37
CDKN1A-201ENST00000244741 MCF2LO15068 1137 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 CKMP06732 381 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 CEBPBP17676 345 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 CDC25CP30307 473 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 RPA3P35244 121 aaPredicted RBP17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 CXCR3P49682 368 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 CDH6P55285 790 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 TBX4P57082 545 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 DPYSL3Q14195 570 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 RASA2Q15283 850 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 FAM182AQ5T1J6 154 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 MSANTD2Q6P1R3 559 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 C3orf62Q6ZUJ4 267 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 FAM47EQ6ZV65 393 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 SERPINB11Q96P15 392 aa17.38■□□□□ 0.37
CDKN1A-201ENST00000244741 SMC6Q96SB8 1091 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms