RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CTBP1Q13363 440 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PRR5LQ6MZQ0 368 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ZNF621Q6ZSS3 439 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SIPA1Q96FS4 1042 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 OSBPL7Q9BZF2 842 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 CLTCQ00610 1675 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 CLDN5O00501 218 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 CNOT3O75175 753 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 SOAT2O75908 522 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ANKRD22Q5VYY1 191 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 DUPD1Q68J44 220 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 FBXO33Q7Z6M2 555 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ZFRQ96KR1 1074 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 DPY30Q9C005 99 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ACTR8Q9H981 624 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GALNT8Q9NY28 637 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 FAM186AA6NE01 2351 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 RECQL5O94762 991 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 RCAN1P53805 252 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 RPL7AP62424 266 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 PROSER1Q86XN7 944 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ABRAQ8N0Z2 381 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 DOCK7Q96N67 2140 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GGA3Q9NZ52 723 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ATXN10Q9UBB4 475 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 TMCC3Q9ULS5 477 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PEX10O60683 326 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ATP6V1G1O75348 118 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GRIA4P48058 902 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GALNT3Q14435 633 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 CACHD1Q5VU97 1274 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 DPY19L2Q6NUT2 758 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 CACTIN-AS1Q8N1I8 211 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 RBM15BQ8NDT2 890 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 ETNPPLQ8TBG4 499 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 REXO5Q96IC2 774 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 MIR1-1HGQ9H1L0 117 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 NDUFA13Q9P0J0 144 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 STARD13Q9Y3M8 1113 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PSMD3O43242 534 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SYNCRIPO60506 623 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 CDH13P55290 713 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 AASDHQ4L235 1098 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 TMEM119Q4V9L6 283 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 TTC27Q6P3X3 843 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 LGMNQ99538 433 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PCDH9Q9HC56 1237 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 AGO4Q9HCK5 861 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 AP4B1Q9Y6B7 739 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PNPLA6Q8IY17 1366 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 E5RJQ4 531 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 DGKEP52429 567 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 UGP2Q16851 508 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GCNT7Q6ZNI0 430 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GANQ9H2C0 597 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SNX10Q9Y5X0 201 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SALL1Q9NSC2 1324 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 KDELR1P24390 212 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 GPC1P35052 558 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PALB2Q86YC2 1186 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ZNHIT2Q9UHR6 403 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 J3QRK9 145 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PSMD12O00232 456 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 NRLP54845 237 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 C2orf73Q8N5S3 287 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 KLHL23Q8NBE8 558 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 POF1BQ8WVV4 589 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 FBXL8Q96CD0 374 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 CCDC166P0CW27 439 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 POLD2P49005 469 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 C12orf29Q8N999 325 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 NKX2-3Q8TAU0 364 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 FOXD2O60548 495 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 CYP2C9P11712 490 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SLC12A3P55017 1021 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 LPIN1Q14693 890 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ZC3H7AQ8IWR0 971 aaKnown RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 RSPH1Q8WYR4 309 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PMM1Q92871 262 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 TUBGCP5Q96RT8 1024 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PCDHB18PQ96TA0 734 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 TRIM8Q9BZR9 551 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 RGS18Q9NS28 235 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ZNF197O14709 1029 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 LIASO43766 372 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SSNA1O43805 119 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 SV2CQ496J9 727 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PAGE2BQ5JRK9 111 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 RNF43Q68DV7 783 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 ANKS3Q6ZW76 656 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 IPCEF1Q8WWN9 437 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 RNFT2Q96EX2 444 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PRMT6Q96LA8 375 aaPredicted RBP7.64□□□□□ -1.19
RIF1-201ENST00000243326 SLITRK1Q96PX8 696 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 NMUR2Q9GZQ4 415 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 NKIRAS2Q9NYR9 191 aa7.64□□□□□ -1.19
RIF1-201ENST00000243326 PRRG1O14668 218 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 POMCP01189 267 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 MEA1Q16626 185 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms