RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 DDX43Q9NXZ2 648 aaKnown RBP15.4■□□□□ 0.06
EFNB1-201ENST00000204961 SFMBT1Q9UHJ3 866 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
EFNB1-201ENST00000204961 CAPN14A8MX76 684 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 AURKAO14965 403 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 LMNAP02545 664 aaKnown RBP15.4■□□□□ 0.06
EFNB1-201ENST00000204961 ATICP31939 592 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 RPS6KA3P51812 740 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 SLC18A1P54219 525 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 BCAT1P54687 386 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 ABCE1P61221 599 aaKnown RBP15.4■□□□□ 0.06
EFNB1-201ENST00000204961 WASHC5Q12768 1159 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 MARCH8Q5T0T0 291 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 TFAP2DQ7Z6R9 452 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 TRIM42Q8IWZ5 723 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 ANKRD52Q8NB46 1076 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 ECSITQ9BQ95 431 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 GMPR2Q9P2T1 348 aaKnown RBP15.4■□□□□ 0.06
EFNB1-201ENST00000204961 V9GYQ6 96 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 SPAG6O75602 509 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 LYNP07948 512 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 ANKRD13AQ8IZ07 590 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 SCAMP5Q8TAC9 235 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 RCN3Q96D15 328 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 GATA5Q9BWX5 397 aaPredicted RBP15.4■□□□□ 0.06
EFNB1-201ENST00000204961 TKTL2Q9H0I9 626 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 MPP6Q9NZW5 540 aa15.4■□□□□ 0.06
EFNB1-201ENST00000204961 HTTP42858 3142 aa15.39■□□□□ 0.06
EFNB1-201ENST00000204961 ARID2Q68CP9 1835 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 TRIP12Q14669 1992 aaPredicted RBP15.39■□□□□ 0.05
EFNB1-201ENST00000204961 OR4Q2P0C623 313 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 BDNFP23560 247 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 GJA5P36382 358 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 ETFBP38117 255 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 HABP4Q5JVS0 413 aaKnown RBP15.39■□□□□ 0.05
EFNB1-201ENST00000204961 TAPT1Q6NXT6 567 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 RPL10LQ96L21 214 aaKnown RBP15.39■□□□□ 0.05
EFNB1-201ENST00000204961 C7orf26Q96N11 449 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 GIMAP2Q9UG22 337 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 SSC5DA1L4H1 1573 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 PDHXO00330 501 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 TRAFD1O14545 582 aaPredicted RBP15.39■□□□□ 0.05
EFNB1-201ENST00000204961 GLRA3O75311 464 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 SERPINE1P05121 402 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 SERPINA6P08185 405 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 ACADSP16219 412 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 ARL1P40616 181 aaPredicted RBP15.39■□□□□ 0.05
EFNB1-201ENST00000204961 ARPP19P56211 112 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 ROR2Q01974 943 aaKnown RBP15.39■□□□□ 0.05
EFNB1-201ENST00000204961 SLC27A1Q6PCB7 646 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 KCNMB4Q86W47 210 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 SORT1Q99523 831 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 PPCSQ9HAB8 311 aa15.39■□□□□ 0.05
EFNB1-201ENST00000204961 TRDMT1O14717 391 aaKnown RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 YBX3P16989 372 aaKnown RBP eCLIP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 RALGDSQ12967 914 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 MPP3Q13368 585 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 ZNF484Q5JVG2 852 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 NT5DC4Q86YG4 428 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 SCN4BQ8IWT1 228 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 B4GALNT2Q8NHY0 566 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 URGCPQ8TCY9 931 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 SLC39A3Q9BRY0 314 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 PIF1Q9H611 641 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 CDH22Q9UJ99 828 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 POMPQ9Y244 141 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 NDC80O14777 642 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 LIN7AO14910 233 aaPredicted RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 GCATO75600 419 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 GSRP00390 522 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 MX2P20592 715 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 MATKP42679 507 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 PLIN5Q00G26 463 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 CSHL1Q14406 222 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 CNGA3Q16281 694 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 DPYSL2Q16555 572 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 ARL13AQ5H913 290 aaPredicted RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 ZNF398Q8TD17 642 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 DIS3LQ8TF46 1054 aaKnown RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 QKIQ96PU8 341 aaKnown RBP eCLIP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 FERMT1Q9BQL6 677 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 TUBB6Q9BUF5 446 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 SSU72Q9NP77 194 aaKnown RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 DDX18Q9NVP1 670 aaKnown RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 KLHL33A6NCF5 533 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 RPL10P27635 214 aaKnown RBP15.38■□□□□ 0.05
EFNB1-201ENST00000204961 CCNFP41002 786 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 BRCC3P46736 316 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 GRIA4P48058 902 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 TAF6P49848 677 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 LILRA4P59901 499 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 ACTR3P61158 418 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 INCA1Q0VD86 236 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 PTPRCAPQ14761 206 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 KIAA0319Q5VV43 1072 aa15.38■□□□□ 0.05
EFNB1-201ENST00000204961 TSNARE1Q96NA8 513 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms