RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 LRRC40Q9H9A6 602 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TMEM59LQ9UK28 342 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CHKBQ9Y259 395 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 HMGCRP04035 888 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CPA3P15088 417 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 PTGIRP43119 386 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 RAD23AP54725 363 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TUBA1BP68363 451 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 PTK2BQ14289 1009 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 MYBPC3Q14896 1274 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 BBS12Q6ZW61 710 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TUBA1AQ71U36 451 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 ELMO2Q96JJ3 720 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 DGCR6LQ9BY27 220 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 EFCAB1Q9HAE3 211 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 LRRC4CQ9HCJ2 640 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 COL20A1Q9P218 1284 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 NOCTQ9UK39 431 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TMEM191CA6NGB0 347 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 ASS1P00966 412 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 ITGAVP06756 1048 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CTSHP09668 335 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 KCNT2Q6UVM3 1135 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 UBE2Q1Q7Z7E8 422 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CPNE8Q86YQ8 564 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 GSTCDQ8NEC7 633 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 MAF1Q9H063 256 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 PCDH18Q9HCL0 1135 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 H3BRB1 525 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 PMPCBO75439 489 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 GLRBP48167 497 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CAPSQ13938 189 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 DGKDQ16760 1214 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 N4BP2L1Q5TBK1 243 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 NET1Q7Z628 596 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 STRA8Q7Z7C7 330 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 SETD3Q86TU7 594 aaPredicted RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 ASZ1Q8WWH4 475 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 TUT1Q9H6E5 874 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 EML4Q9HC35 981 aaKnown RBP12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 KIF17Q9P2E2 1029 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CDYLQ9Y232 598 aa12.36□□□□□ -0.43
TSPAN9-201ENST00000011898 CCDC85CA6NKD9 419 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 KCNK1O00180 336 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PDHXO00330 501 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 CHRNB2P17787 502 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 AMPD1P23109 780 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 CNTFP26441 200 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PNPLA4P41247 253 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 P2RX7Q99572 595 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 TMEM109Q9BVC6 243 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 ST6GALNAC4Q9H4F1 302 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 WDCPQ9H6R7 721 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 SCN3BQ9NY72 215 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 STK25O00506 426 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 SNPHO15079 494 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 ATF4P18848 351 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 HOXD13P35453 343 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 INHBEP58166 350 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 TUBA4AP68366 448 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 FCHO2Q0JRZ9 810 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 ANKRD23Q86SG2 305 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PSMA8Q8TAA3 256 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 IARS2Q9NSE4 1012 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 SLC12A4Q9UP95 1085 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 A0A0B4J269 797 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PSMD3O43242 534 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PSMB9P28065 219 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 IFNA8P32881 189 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 GRIK1P39086 918 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 HPCAP84074 193 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 MGAT5Q09328 741 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 TSTA3Q13630 321 aaPredicted RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 CAPRIN1Q14444 709 aaKnown RBP12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 DCAF4L1Q3SXM0 396 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 ZDHHC24Q6UX98 284 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 HTRA1Q92743 480 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 TSPAN18Q96SJ8 248 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 CDRT15Q96T59 188 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 DIABLOQ9NR28 239 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms