RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Olfr1499Q8VG65 314 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 PdgfdQ925I7 370 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Katnal2Q9D3R6 539 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 1700018B08RikQ9DA83 213 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Lima1Q9ERG0 753 aaKnown RBP9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 GzmgP13366 248 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Lta4hP24527 611 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Pnpla5Q32LZ8 432 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Cyp4f37Q3V1F1 546 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 LbpQ61805 481 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Znf512Q69Z99 562 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Stx5Q8K1E0 355 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Pcdhga10Q91XY9 930 aa9.39□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gm5565A0A0G2JGB2 317 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Celf5D3Z4T1 395 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 FaahO08914 579 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 CidebO70303 219 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Fbln1Q08879 705 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Dennd1bQ3U1T9 766 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Tp53bp2Q8CG79 1128 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rxfp2Q91ZZ5 737 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Tmx2Q9D710 295 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 MkksQ9JI70 570 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Arap3Q8R5G7 1538 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Unc13bQ9Z1N9 1602 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gm8257E9Q8R3 264 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Magea4F2Z493 315 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Magea8O89012 320 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Zfp217Q3U0X6 1041 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Psg29Q3URN6 468 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Klra8Q60682 266 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Ptger2Q62053 362 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Dyrk4Q8BI55 632 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Tyw3Q8BSA9 257 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Arl8bQ9CQW2 186 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 GarsQ9CZD3 729 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 MtrexQ9CZU3 1040 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Cdyl2Q9D5D8 503 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Cnbd2Q9D5U8 673 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 H2afyQ9QZQ8 372 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Pdia2D3Z6P0 527 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Erich1E9PY43 332 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 IduaP48441 634 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Tespa1Q3U132 458 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Ipcef1Q5DU31 406 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Kcna5Q61762 602 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 SynpoQ8CC35 929 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rtfdc1Q99K95 307 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rwdd2bQ99M03 290 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Q9CPS8 106 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 CoprsQ9CQ13 173 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Cog8Q9JJA2 640 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Bmp15Q9Z0L4 392 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 4921501E09RikA0A0R4J054 908 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gm8897L7N294 181 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 YwhaqP68254 245 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Tbx1P70323 479 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rgs16P97428 201 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gabra5Q8BHJ7 463 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Cpsf4Q8BQZ5 211 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Nlrp4bQ8C6J9 863 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Vmn1r64Q8R2B8 320 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Nudt8Q9CR24 210 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Ten1Q9D7K2 161 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gm13941A2AJ38 245 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Mcpt4P21812 246 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Ccna2P51943 422 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Aqp8P56404 261 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Pdss1Q33DR2 409 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rbm12b1Q80YR9 836 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Lrrc24Q8BHA1 521 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 NrrosQ8BMT4 693 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Snx17Q8BVL3 470 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 FktnQ8R507 461 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Clec4aQ9QZ15 238 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Zfp358E9Q8M1 571 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Axin1O35625 863 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rin3P59729 980 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 RalgdsQ03385 852 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Phactr1Q2M3X8 580 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gm11437Q5QR91 290 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 9930111J21Rik1Q5SVP0 844 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Brip1Q5SXJ3 1174 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Rundc3bQ6PDC0 408 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Sgo2Q7TSY8 1164 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gxylt2Q810K9 444 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Ccdc59Q8R2N0 240 aaKnown RBP9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Cpt1bQ924X2 772 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Lrp8Q924X6 996 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Acot13Q9CQR4 140 aa9.38□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Sipa1l2Q80TE4 1722 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Gm8926L7MUE8 181 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Adam15O88839 864 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 S100a9P31725 113 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 UcmaQ14BU0 138 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Klrg2Q3UM83 387 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Slc9b2Q5BKR2 547 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 Tp53i13Q5F267 385 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 P4ha2Q60716 537 aa9.37□□□□□ -0.91
Scn8a-213ENSMUST00000201549 BegainQ68EF6 600 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms