RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Extl1Q9JKV7 669 aa6.4□□□□□ -1.38
Lig4-202ENSMUST00000170033 Iigp1Q9QZ85 413 aa6.4□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ggps1Q9WTN0 300 aa6.4□□□□□ -1.38
Lig4-202ENSMUST00000170033 Ptpn4Q9WU22 926 aa6.4□□□□□ -1.38
Lig4-202ENSMUST00000170033 Rabgap1lA6H6A9 815 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Mybpc1D3YU50 1127 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 1700064H15RikD3Z4D4 81 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kifc5bE9PUA5 672 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kdelc2G5E897 503 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 CenpaO35216 134 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Aff2O55112 1272 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cbfa2t2O70374 594 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Igf2bp1O88477 577 aaKnown RBP6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Mup5P11591 180 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sstr1P30873 391 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pdha2P35487 391 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kir3dl1P83555 432 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pdss1Q33DR2 409 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Olfm4Q3UZZ4 505 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Snx25Q3ZT31 840 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Zbtb8osQ505B7 168 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Tcf4Q60722 670 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sdf4Q61112 361 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Itih1Q61702 907 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Armcx2Q6A058 784 aaKnown RBP6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ccdc117Q6PB51 277 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Trim62Q80V85 475 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Q810S2 196 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Brat1Q8C3R1 822 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 CcinQ8CDE2 588 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sbk1Q8QZX0 417 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 ClmpQ8R373 373 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 RnpepQ8VCT3 650 aaKnown RBP6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ddx39aQ8VDW0 427 aaKnown RBP6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Lpgat1Q91YX5 370 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Pgm3Q9CYR6 542 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Zcchc12Q9CZA5 402 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cldn22Q9D7U6 220 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ccdc103Q9D9P2 237 aa6.4□□□□□ -1.39
Lig4-202ENSMUST00000170033 Wscd2D4PHA7 571 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Olfr600E9PUN7 314 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 2210016F16RikG3X8U3 338 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Tekt5G5E8A8 557 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sema3aO08665 772 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Matn2O08746 956 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Serpinb9O08797 374 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Slc2a7P0C6A1 513 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 GzmgP13366 248 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kpna2P52293 529 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Scarf2P59222 833 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Arpc4P59999 168 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Olfm3P63056 478 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rack1P68040 317 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Eif2ak2Q03963 515 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Arhgap1Q5FWK3 439 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Olfr293Q7TS10 336 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Vat1lQ80TB8 417 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Lrrc27Q80YS5 523 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Nipal1Q8BMW7 416 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Vps37bQ8R0J7 285 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Nudcd3Q8R1N4 363 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 PdgfdQ925I7 370 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Gimap3Q99MI6 301 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Tomm20lQ9D4V6 152 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ift43Q9DA69 206 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 IcmtQ9EQK7 283 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Dnajb8Q9QYI7 227 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Dnajb1Q9QYJ3 340 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Dlc1Q9R0Z9 1092 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Noc2lQ9WV70 747 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 LctF8VPT3 1931 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Mindy4b-psA0A1W2P7H6 457 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Gm12248A0A1W2P8B8 313 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kpna7C0LLJ0 499 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cdr1E9Q0B4 517 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Eef1bO70251 225 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Klc2O88448 599 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Adam15O88839 864 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 NppaP05125 152 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Ndufs6P52503 116 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Gmeb2P58929 530 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Il1rapl1P59823 695 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Emilin3P59900 758 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Krt26Q3TRJ4 462 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 PkdccQ5RJI4 492 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Traf3Q60803 567 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cyp3a16Q64481 504 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Nomo1Q6GQT9 1214 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Arhgap20Q6IFT4 1182 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Scaf4Q6PFF0 1209 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Cand1Q6ZQ38 1230 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Baiap2l2Q80Y61 522 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Spata20Q80YT5 790 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Usp1Q8BJQ2 784 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Rfx6Q8C7R7 927 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Fbxl13Q8CDU4 790 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Stau2Q8CJ67 570 aaKnown RBP6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Sulf1Q8K007 870 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Kctd15Q8K0E1 283 aa6.39□□□□□ -1.39
Lig4-202ENSMUST00000170033 Abhd8Q8R0P8 439 aa6.39□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms