RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cdk9Q99J95 372 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ddx21Q9JIK5 851 aaKnown RBP16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Bmpr2O35607 1038 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Zbtb48Q1H9T6 681 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Mif4gdQ3UBZ5 222 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Mansc4Q3UU94 337 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ppp1r13lQ5I1X5 824 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Phc1Q64028 1012 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rtl3Q6P1Y1 553 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Prr18Q6PAN7 307 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gtf3c4Q8BMQ2 817 aaKnown RBP16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Tmx4Q8C0L0 335 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Abhd8Q8R0P8 439 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Vmn2r25W4VSP2 855 aa16.24■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ccdc13D3YV10 709 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Kctd18E0CZ26 429 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Unc5cO08747 931 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Cdc6O89033 562 aaKnown RBP16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gabpb1Q00420 383 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Stxbp5lQ5DQR4 1185 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Prr11Q8BHE0 368 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Pwp2Q8BU03 919 aaKnown RBP16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 HpdlQ8K248 371 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Pdcd7Q9WTY1 482 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Flt3lgP49772 232 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 PctpP53808 214 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Lsmem1Q3UQS2 128 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Xkr5Q5GH66 676 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 PtprjQ64455 1238 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr1128Q7TR47 311 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Exoc3l1Q8BI71 739 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ndufa10Q99LC3 355 aaKnown RBP16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Nt5c3aQ9D020 331 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Taf7lQ9D3R9 471 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Aldh18a1Q9Z110 795 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Sept5Q9Z2Q6 369 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ifi206G3UZV2 921 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Itm2bO89051 266 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Timm13P62075 95 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Orai3Q6P8G8 290 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Chsy1Q6ZQ11 800 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Klhl29Q80T74 875 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Pcdhb11Q91UZ8 797 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Lysmd3Q99LE3 305 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 EtfbQ9DCW4 255 aaKnown RBP16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ccr10Q9JL21 362 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Wdr54Q9R0D8 334 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Crlf3Q9Z2L7 442 aa16.23■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rabgap1lA6H6A9 815 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 P01878 344 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Lsp1P19973 330 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ccdc61Q3UJV1 511 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Spag6Q3V0U9 509 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Kctd13Q8BGV7 329 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Dcun1d2Q8BZJ7 259 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Scara3Q8C850 606 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Eef1akmt2Q9D853 244 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Znf518bB2RRE4 1077 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Vmn2r67K7N6T2 851 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Rgs2O08849 211 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Hoxd8P23463 289 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gpr65Q61038 337 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Vwa2Q70UZ7 791 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Podxl2Q8CAE9 603 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Pcdhb3Q91XZ7 784 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Fbxo32Q9CPU7 355 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Sun1Q9D666 913 aaKnown RBP16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ror1Q9Z139 937 aa16.22■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ism1A2ATD1 454 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gfra2O08842 464 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Kifc3O35231 824 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Btg4O70552 250 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ap2a1P17426 977 aaKnown RBP16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Cd72P21855 354 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 YwhaqP68254 245 aaKnown RBP16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Sult1d1Q3UZZ6 295 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gdpd5Q640M6 607 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Fam205cQ80YD3 371 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Ccdc68Q8BVC4 333 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gspt1Q8R050 636 aaKnown RBP16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Alg9Q8VDI9 611 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Znf622Q91VY9 476 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 M1apQ9Z0E1 529 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gbf1Q6DFZ1 1861 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Gm8334F7CD45 553 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr611K7N609 323 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Olfr612L7N462 323 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Itgb1P09055 798 aaKnown RBP16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 TubP50586 505 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Sash1P59808 1230 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Smad1P70340 465 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Wbp2P97765 261 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Cgref1Q8R1U2 281 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Tmem30aQ8VEK0 364 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Q9CPS8 106 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Padi3Q9Z184 664 aa16.21■□□□□ 0.19
Trim39-203ENSMUST00000113706 Scn8aQ9WTU3 1978 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Smok3aC0HKC8 504 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Smok3bC0HKC9 504 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Myl4P09541 193 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms