RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Ly6aP05533 134 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Eno1P17182 434 aaKnown RBP12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Gabrr2P56476 465 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Cdo1P60334 200 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Ybx1P62960 322 aaKnown RBP12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Eif4ebp2P70445 120 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 SiaeP70665 541 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Atp8b1Q148W0 1251 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 4930502E18RikQ14BQ3 236 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 HelqQ2VPA6 1069 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Tespa1Q3U132 458 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 2700097O09RikQ6PGK3 301 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Dpy19l3Q71B07 716 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Ofcc1Q8BGX4 166 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Gcfc2Q8BKT3 769 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Bicd1Q8BR07 835 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Dnali1Q8BVN8 258 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Ldlrap1Q8C142 308 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Ccdc134Q8C7V8 229 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Epc1Q8C9X6 813 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Lgi2Q8K4Z0 550 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Caap1Q8VDY9 356 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Ovca2Q9D7E3 225 aa12.72□□□□□ -0.37
Trim50-202ENSMUST00000111180 Chd7A2AJK6 2986 aaKnown RBP12.71□□□□□ -0.37
Trim50-202ENSMUST00000111180 Gm9573F7C950 1606 aa12.71□□□□□ -0.37
Trim50-202ENSMUST00000111180 Ccdc170D3YXL0 722 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Serpina3iD3Z450 408 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Wisp1O54775 367 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Pdk4O70571 412 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 TyrP11344 533 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Htr2cP34968 459 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ptger1P35375 405 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 TubP50586 505 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 PolgP54099 1218 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Pdcd1Q02242 288 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 RnaselQ05921 735 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Prickle1Q3U5C7 832 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Zyg11bQ3UFS0 744 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ccdc34Q3UI66 367 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Lsmem1Q3UQS2 128 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Foxr1Q3UTB7 268 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Znf583Q3V080 568 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Srbd1Q497V5 1015 aaKnown RBP12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Psg28Q4KL66 472 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Spire1Q52KF3 598 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Fbxw2Q60584 422 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Heatr6Q6P1G0 1184 aaKnown RBP12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Atl2Q6PA06 583 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ccdc154Q6RUT8 657 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Chsy1Q6ZQ11 800 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Olfr20Q7TRX9 314 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 CslQ80X68 466 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ppp1r15bQ8BFW3 697 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Olfm2Q8BM13 448 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Nipal4Q8BZF2 406 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Pak5Q8C015 719 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Q8C1R3 189 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Prr33Q8C494 260 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ddx18Q8K363 660 aaKnown RBP12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 ClmpQ8R373 373 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Lrrc14Q8VC16 493 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Asz1Q8VD46 475 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 AjubaQ91XC0 547 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Pcdha1Q91Y21 948 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Alpk2Q91ZB0 2144 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Vangl2Q91ZD4 521 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Lpin1Q91ZP3 924 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Smarcd2Q99JR8 531 aaKnown RBP12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ndufb5Q9CQH3 189 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 ArpinQ9D0A3 226 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Eef1akmt2Q9D853 244 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Dydc1Q9D9T0 175 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Tsga13Q9DA17 273 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Dnajb1Q9QYJ3 340 aaKnown RBP12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Trpc7Q9WVC5 862 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Sema4fQ9Z123 777 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Cog1Q9Z160 980 aa12.71□□□□□ -0.38
Trim50-202ENSMUST00000111180 Abhd12bG3UZN6 359 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Vmn2r88L7N1W8 857 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Shoc2O88520 582 aaKnown RBP12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 PorP37040 678 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Il12bP43432 335 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ddx6P54823 483 aaKnown RBP12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Vps45P97390 570 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Rgs9bpQ148R9 237 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 FaxcQ3UMF9 409 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Gm14685Q52KH6 695 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Vps41Q5KU39 853 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 HiraQ61666 1015 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ndrg1Q62433 394 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 TCAIMQ66JZ4 499 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 OcrlQ6NVF0 900 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Baiap2l2Q80Y61 522 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Dnajb13Q80Y75 316 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Vipas39Q8BGQ1 491 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Q8BHN7 327 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Ccdc40Q8BI79 1192 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Lrfn3Q8BLY3 626 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Brd8Q8R3B7 951 aa12.7□□□□□ -0.38
Trim50-202ENSMUST00000111180 Emid1Q91VF5 444 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 115.4 ms