RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Slitrk2Q810C0 846 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ldhal6bQ8BVP2 382 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Cog2Q921L5 731 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Slc26a3Q9WVC8 757 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Il18rapQ9Z2B1 614 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Fam166bA2AIP0 273 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ccdc149F6V035 524 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Mup13L7N222 235 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Nr3c1P06537 783 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Wee2Q66JT0 555 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Samd4bQ80XS6 687 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Lin7aQ8JZS0 233 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Atp6ap2Q9CYN9 350 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Cul2Q9D4H8 745 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ppil6Q9D6D8 278 aa16.05■□□□□ 0.16
Clcn3-203ENSMUST00000093490 4933424G06RikA0A140LIP3 267 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Emilin3P59900 758 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 TankP70347 448 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Brip1Q5SXJ3 1174 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Hesx1Q61658 185 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Usp7Q6A4J8 1103 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Lrrc24Q8BHA1 521 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 LnpepQ8C129 1025 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Mcrs1Q99L90 462 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 MipepA6H611 711 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Smok3aC0HKC8 504 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Smok3bC0HKC9 504 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Pde8aO88502 823 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 FpgsP48760 587 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Kcna4Q61423 654 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Klra3Q64329 266 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Olfr1057Q7TR75 315 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Smyd2Q8R5A0 433 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Syt12Q920N7 421 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Nkd1Q99MH6 471 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Acot13Q9CQR4 140 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Tcirg1Q9JHF5 834 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Srsf11E9Q6E5 511 aaKnown RBP16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 AlpiF8VPQ6 554 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gml2G5E8L7 176 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Rpl5P47962 297 aaKnown RBP16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sema4bQ62179 823 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 ZyxQ62523 564 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Fam149b1Q6NSV7 578 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 PolnQ7TQ07 864 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Pramel7Q810Y8 479 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Mettl21cQ8BLU2 248 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Btbd9Q8C726 612 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Olfr1467Q8VFW1 308 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Chst15Q91XQ5 561 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Tnfaip8l2Q9D8Y7 184 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Copg1Q9QZE5 874 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ces1cP23953 554 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 PhgdhQ61753 533 aaKnown RBP16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sema3cQ62181 751 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Garem2Q6PAJ3 880 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Igdcc3Q8BQC3 813 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sh3kbp1Q8R550 709 aaKnown RBP16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Satl1Q9D5N8 744 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Cables1Q9ESJ1 568 aa16.04■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Rpl21O09167 160 aaKnown RBP16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Tnk2O54967 1055 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Kcnu1O54982 1121 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sephs2P97364 452 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 CrtamQ149L7 389 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Lrrc47Q505F5 581 aaKnown RBP16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ugt1a9Q62452 528 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Atg16l2Q6KAU8 623 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Olfr297Q7TS07 310 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sfr1Q8BP27 319 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Txnrd2Q9JLT4 524 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gipc2Q9Z2H7 314 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 PdgfaP20033 211 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 PnmtP40935 295 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Cul4aQ3TCH7 759 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Alkbh5Q3TSG4 395 aaKnown RBP16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Cep44Q5HZK1 386 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Fbxw2Q60584 422 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gpatch2lQ6PE65 482 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Rps6ka6Q7TPS0 764 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ahcyl1Q80SW1 530 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Pgrmc2Q80UU9 217 aaKnown RBP16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Mfsd14bQ8CIA9 507 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 IlkapQ8R0F6 392 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Trmt1lA2RSY6 728 aaKnown RBP16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3252E9PUT9 216 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm2956E9PVJ0 216 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3002E9PW72 216 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3468E9QAJ8 216 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm8108K7N734 216 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3739L7N296 216 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3164L7N2B9 238 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3488M0QW81 238 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sstr1P30873 391 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gpatch4Q3TFK5 415 aaKnown RBP16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 MelkQ61846 643 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Parp6Q6P6P7 630 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Dis3lQ8C0S1 1053 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sfrp1Q8C4U3 314 aa16.03■□□□□ 0.16
Clcn3-203ENSMUST00000093490 ClyblQ8R4N0 338 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms