RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 GsnP13020 780 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 PrkceP16054 737 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ubl4aP21126 157 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Aff3P51827 1254 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cacnb3P54285 484 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Trim75Q3UWZ0 467 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rbm44Q3V089 1013 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 EndouQ3V188 412 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Odr4Q4PJX1 447 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 St8sia4Q64692 359 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cspg5Q71M36 566 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gpr141Q7TQP0 305 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 NfascQ810U3 1240 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc7a14Q8BXR1 771 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Prpf39Q8K2Z2 665 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ddx18Q8K363 660 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tasp1Q8R1G1 420 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Mmgt2Q8R3L0 123 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 AcmsdQ8R519 336 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Zbtb1Q91VL9 713 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Adcy4Q91WF3 1077 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Adi1Q99JT9 179 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Clstn1Q9EPL2 979 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tmod4Q9JLH8 345 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Dach1Q9QYB2 751 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc22a3Q9WTW5 551 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Smarcb1Q9Z0H3 385 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm7356A0A087WSA6 508 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cd300ld2A2A7W0 305 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Arid3cA6PWV5 409 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ace3D0G895 737 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Sult2a3D3Z1W5 285 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Usp17ldG5E8G2 545 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Usp17lcG5E8I7 545 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ptpn9O35239 593 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc1a6O35544 561 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Nr3c1P06537 783 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 JunbP09450 344 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 UmpsP13439 481 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cetn1P41209 172 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Nedd4P46935 887 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ppp3cbP48453 525 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Hsdl2Q2TPA8 490 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Alkbh5Q3TSG4 395 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Zfyve28Q6ZPK7 905 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Eri1Q7TMF2 345 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Plekha6Q7TQG1 1173 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Clec4a1Q80UI7 245 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rbm12b1Q80YR9 836 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm6377Q8BHV4 303 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 DseQ8BLI4 958 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cadm2Q8BLQ9 435 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 OptcQ920A0 328 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Serpinb11Q9CQV3 388 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 CabyrQ9D424 453 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tlr6Q9EPW9 795 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Znf354bQ9QXT9 601 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Unc13bQ9Z1N9 1602 aa9.92□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 UprtB1AVZ0 310 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 TagapB2RWW0 714 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Armc4B2RY50 1037 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Itga10E9Q6R1 1167 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 NgpO08692 167 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Socs2O35717 198 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Hcn2O88703 863 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cyp2b10P12791 500 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kcna1P16388 495 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rab20P35295 233 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pik3caP42337 1068 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm13103Q4VAD2 491 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Zc3h11aQ6NZF1 792 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pik3c3Q6PF93 887 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Phf21aQ6ZPK0 659 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Peg10Q7TN75 958 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Nmur2Q8BZ39 395 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm5591Q8CDK1 855 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Olfr985Q8VGB4 311 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Trpv6Q91WD2 767 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kcnh5Q920E3 988 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Lpin3Q99PI4 848 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Krt34Q9D646 392 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Htr3bQ9JHJ5 437 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ap3m1Q9JKC8 418 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc5a3Q9JKZ2 718 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Htra1Q9R118 480 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Skint1A7TZE6 364 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 LipiF6YQT7 476 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm20695H3BLK7 282 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Tal1P22091 329 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pcmt1P23506 227 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Drg1P32233 367 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 WasP70315 520 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Eps8Q08509 821 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kif22Q3V300 660 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ehmt1Q5DW34 1296 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 MogQ61885 246 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ifngr2Q63953 332 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gpd2Q64521 727 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 WaplQ65Z40 1200 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Krt87Q6IMF0 495 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms