RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ankrd63A2ARS0 390 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pik3c3Q6PF93 887 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rassf3Q99P51 232 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ppil6Q9D6D8 278 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Copz1P61924 177 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 BlmhQ8R016 455 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 4930519G04RikQ9CPT7 205 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pgrmc2Q80UU9 217 aaKnown RBP16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nrde2Q80XC6 1172 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gpt2Q8BGT5 522 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mgat5Q8R4G6 740 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Lrrc49Q91YK0 686 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 RhoaQ9QUI0 193 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Alox5P48999 674 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Awat2Q6E1M8 333 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Cpsf4Q8BQZ5 211 aaKnown RBP16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Usp27Q8CEG8 438 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hdhd5Q91WM2 419 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Col14a1Q80X19 1797 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tmem109Q3UBX0 243 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Klra6Q60653 266 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tas2r134Q7TQB0 298 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Spata20Q80YT5 790 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tsen34Q8BMZ5 316 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Bhlhe22Q8C6A8 355 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 CherpQ8CGZ0 936 aaKnown RBP16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Znf24Q91VN1 368 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Eif3mQ99JX4 374 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Clcn2Q9R0A1 908 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ddx60E9PZQ1 1711 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Robo2Q7TPD3 1470 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 RelaQ04207 549 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 MtrrQ8C1A3 696 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Asb14Q8C6Y6 587 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fam96aQ9DCL2 160 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Serpini2Q9JK88 405 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mta2Q9R190 668 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Vmn2r39L7N2E5 861 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ephb2P54763 986 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Anxa4P97429 319 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Dlg4Q62108 724 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 N4bp1Q6A037 893 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Podnl1Q6P3Y9 559 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ttc39cQ8VE09 580 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tbx20Q9ES03 445 aa16.85■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Crb1Q8VHS2 1405 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 MrasO08989 208 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 B3gat3P58158 335 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pla2g6P97819 807 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ttc8Q8VD72 515 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mapk8Q91Y86 384 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 DtymkP97930 212 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rabl6Q5U3K5 725 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Lcn3Q62471 182 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Chaf1bQ9D0N7 572 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 AglF8VPN4 1532 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Il4i1O09046 630 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fgfr1P16092 822 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Cyp19a1P28649 503 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 RxraP28700 467 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 DctP29812 517 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 AcadlP51174 430 aaKnown RBP16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nat8lQ3UGX3 299 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 D630036H23RikQ3UQD6 204 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pcdh19Q80TF3 1145 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Itfg1Q99KW9 610 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fam111aQ9D2L9 613 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gm8906L7N2A2 181 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pax3P24610 479 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Itga4Q00651 1039 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 ChpfQ6IQX7 774 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ldoc1Q7TPY9 151 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Arhgef33Q8BW86 850 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Plac9Q8K262 108 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Plbd1Q8VCI0 550 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ehd3Q9QXY6 535 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gm44511A0A0N4SW10 223 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Dhx33Q80VY9 698 aaKnown RBP16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gpr1Q8K087 353 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gmcl1Q920G9 524 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Chmp1b2Q9CQD4 199 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ssr3Q9DCF9 185 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 MipepA6H611 711 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Klhl4B1AZR0 717 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Bbip1J3QMK2 67 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Slc1a6O35544 561 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 RhocQ62159 193 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Crls1Q80ZM8 303 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Lpcat2Q8BYI6 544 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hist1h2aaQ8CGP4 129 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Slc25a38Q91XD8 326 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ndufv1Q91YT0 464 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gemin6Q9CX53 166 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Map2P20357 1828 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nipsnap3aB1AWZ3 247 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 MttpO08601 894 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Il1rl1P14719 567 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Elk3P41971 409 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Smad5P97454 465 aa16.84■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Dnali1Q8BVN8 258 aa16.84■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms