RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
TCF4-289ENST00000637941 CASS4Q9NQ75 786 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 SETD4Q9NVD3 440 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 ZDHHC7Q9NXF8 308 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 RRN3Q9NYV6 651 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 BCAP29Q9UHQ4 241 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 SSX2IPQ9Y2D8 614 aa13.03□□□□□ -0.32
TCF4-289ENST00000637941 F5H423 210 aaPredicted RBP13.02□□□□□ -0.33
TCF4-289ENST00000637941 SLC22A2O15244 555 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 NCF2P19878 526 aaPredicted RBP13.02□□□□□ -0.33
TCF4-289ENST00000637941 DNAJB1P25685 340 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 SERPINB6P35237 376 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 MLH1P40692 756 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 PSEN1P49768 467 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 TPI1P60174 286 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 SLC25A3Q00325 362 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 HNRNPDQ14103 355 aaKnown RBP13.02□□□□□ -0.33
TCF4-289ENST00000637941 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 PGM2L1Q6PCE3 622 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 SLC30A9Q6PML9 568 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 SETD3Q86TU7 594 aaPredicted RBP13.02□□□□□ -0.33
TCF4-289ENST00000637941 TMEM135Q86UB9 458 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 DNAAF3Q8N9W5 541 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 OR6Y1Q8NGX8 325 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 RTKNQ9BST9 563 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 MAGEB5Q9BZ81 275 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 SLC17A6Q9P2U8 582 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 TSC2P49815 1807 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 NRCAMQ92823 1304 aa13.02□□□□□ -0.33
TCF4-289ENST00000637941 CCDC189A1A4V9 331 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 TRIM13O60858 407 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PRKCGP05129 697 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PTPN3P26045 913 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PPIDQ08752 370 aaKnown RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 ASPHQ12797 758 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 CDC16Q13042 620 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PRPSAP1Q14558 356 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 EPGNQ6UW88 154 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 KBTBD2Q8IY47 623 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 GSTCDQ8NEC7 633 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 SERPINI1Q99574 410 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 IL22Q9GZX6 179 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 GBA3Q9H227 469 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 A0A096LPK6 155 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 C9IYK1 514 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 SLCO1B7G3V0H7 640 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 ZNF195O14628 629 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 FAM200BP0CF97 657 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 ADRA1BP35368 520 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 TUBP50607 506 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 GJA9P57773 515 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 NME3Q13232 169 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 MPP3Q13368 585 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 CUL3Q13618 768 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 ANKRD20A4Q4UJ75 823 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PPM1JQ5JR12 505 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 IQSEC1Q6DN90 963 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 MAVSQ7Z434 540 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 CLEC14AQ86T13 490 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 LINC00523Q86TU6 105 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 RSPH3Q86UC2 560 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 FBXW8Q8N3Y1 598 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 SLC26A7Q8TE54 656 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 ZNF483Q8TF39 744 aaPredicted RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 IFT43Q96FT9 208 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 OSMRQ99650 979 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 SH3GL3Q99963 347 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 MED10Q9BTT4 135 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 KLHL4Q9C0H6 718 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 ILKAPQ9H0C8 392 aaPredicted RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 CXCL16Q9H2A7 254 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PPM1HQ9ULR3 514 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 PRPF19Q9UMS4 504 aaKnown RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 HES2Q9Y543 173 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 NR2E3Q9Y5X4 410 aa13.01□□□□□ -0.33
TCF4-289ENST00000637941 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
TCF4-289ENST00000637941 SYNJ2BP-COX16A0A087WUM0 186 aa13□□□□□ -0.33
TCF4-289ENST00000637941 HCRTO43612 131 aa13□□□□□ -0.33
TCF4-289ENST00000637941 F9P00740 461 aa13□□□□□ -0.33
TCF4-289ENST00000637941 LYNP07948 512 aa13□□□□□ -0.33
TCF4-289ENST00000637941 THRAP10827 490 aa13□□□□□ -0.33
TCF4-289ENST00000637941 COX4I1P13073 169 aa13□□□□□ -0.33
TCF4-289ENST00000637941 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
TCF4-289ENST00000637941 ERCC2P18074 760 aa13□□□□□ -0.33
TCF4-289ENST00000637941 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
TCF4-289ENST00000637941 ADSLP30566 484 aaPredicted RBP13□□□□□ -0.33
TCF4-289ENST00000637941 POLD2P49005 469 aa13□□□□□ -0.33
TCF4-289ENST00000637941 EPHB1P54762 984 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms