RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 PACS1Q6VY07 963 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 C8orf48Q96LL4 319 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 TSGA13Q96PP4 275 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 TSSK1BQ9BXA7 367 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 ECT2Q9H8V3 914 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 LRRC40Q9H9A6 602 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 VANGL2Q9ULK5 521 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 SCML2Q9UQR0 700 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 RPS6KL1Q9Y6S9 549 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 TTC3P53804 2025 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 A0A1W2PQH9 124 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 CFAP73A6NFT4 308 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 ARHGAP42A6NI28 874 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 MSI1O43347 362 aaKnown RBP20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 USP12O75317 370 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 TADA2AO75478 443 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 DCTN3O75935 186 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 IL1BP01584 269 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 JCHAINP01591 159 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 GTF2A1P52655 376 aaPredicted RBP20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 SETDB1Q15047 1291 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 VARS2Q5ST30 1063 aaKnown RBP20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 ARTNQ5T4W7 220 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 LRRC8DQ7L1W4 858 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 MON1AQ86VX9 555 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 ARHGAP12Q8IWW6 846 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 NDUFAF2Q8N183 169 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 LZTR1Q8N653 840 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 CATSPERBQ9H7T0 1116 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 PCMTD2Q9NV79 361 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 CHKBQ9Y259 395 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 BGNP21810 368 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 CCNCP24863 283 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 HNRNPH1P31943 449 aaKnown RBP20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 FRG1Q14331 258 aaKnown RBP20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 SWT1Q5T5J6 900 aaKnown RBP20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 TMEM135Q86UB9 458 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 NUP93Q8N1F7 819 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 DNAAF3Q8N9W5 541 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 ACMSDQ8TDX5 336 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 TBC1D31Q96DN5 1066 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 CERS2Q96G23 380 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 SERPINB11Q96P15 392 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 LRRC37BQ96QE4 947 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 NPHS2Q9NP85 383 aa20.16■□□□□ 0.82
PCDHB11-202ENST00000624887 KCNU1A8MYU2 1149 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 C2CD2LO14523 706 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 CACNG3O60359 315 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 NEFHP12036 1026 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 SELPP16109 830 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 SKIV2L2P42285 1042 aaKnown RBP20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 TRIM42Q8IWZ5 723 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 KLHDC8BQ8IXV7 354 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 FCRL3Q96P31 734 aaPredicted RBP20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 FBXO44Q9H4M3 255 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 ELAC1Q9H777 363 aaKnown RBP20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 KLC4Q9NSK0 619 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 OSER1Q9NX31 292 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 SLC17A6Q9P2U8 582 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 PLXNA3P51805 1871 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 TGDSO95455 350 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 NPY2RP49146 381 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 NRG1Q02297 640 aaPredicted RBP20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 PRPSAP1Q14558 356 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 DDR2Q16832 855 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 CES3Q6UWW8 571 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 CNTD1Q8N815 330 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 ARMC2Q8NEN0 867 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 SH3TC2Q8TF17 1288 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 MYLK2Q9H1R3 596 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 ZFATQ9P243 1243 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 NUDT5Q9UKK9 219 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 PCDHB5Q9Y5E4 795 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 PSAT1Q9Y617 370 aa20.15■□□□□ 0.82
PCDHB11-202ENST00000624887 DFFAO00273 331 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 HGSO14964 777 aaPredicted RBP20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 USP1O94782 785 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 MAGEA11P43364 429 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 MRPL58Q14197 206 aaKnown RBP20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 PLEKHG4Q58EX7 1191 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 SDHAF4Q5VUM1 108 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 MSANTD2Q6P1R3 559 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 CYB5D1Q6P9G0 228 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 RASSF3Q86WH2 238 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ATPAF2Q8N5M1 289 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ERP27Q96DN0 273 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 BEGAINQ9BUH8 593 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 TRIM55Q9BYV6 548 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ADAM28Q9UKQ2 775 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 PHF24Q9UPV7 400 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 MAGEB16A2A368 324 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 AP3B1O00203 1094 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 PSMD3O43242 534 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ALDOAP04075 364 aaKnown RBP20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 ERVK-10P10266 1014 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 CCNB1P14635 433 aa20.14■□□□□ 0.81
PCDHB11-202ENST00000624887 GPR15P49685 360 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms