RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 SH3BGRP55822 239 aaPredicted RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 IRX4P78413 519 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 ADGRE1Q14246 886 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 PPP6R3Q5H9R7 873 aaPredicted RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 FSCBQ5H9T9 825 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 FSTL4Q6MZW2 842 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 ZNF567Q8N184 647 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 PYROXD2Q8N2H3 581 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 TMEM102Q8N9M5 508 aaPredicted RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 ZSCAN18Q8TBC5 510 aaPredicted RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 MAELQ96JY0 434 aaKnown RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 LENG8Q96PV6 779 aaPredicted RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 CAMKK2Q96RR4 588 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
SKP2-209ENST00000620197 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 GGA3Q9NZ52 723 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 LMCD1Q9NZU5 365 aa13.38□□□□□ -0.27
SKP2-209ENST00000620197 DCLK1O15075 740 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 OR6B1O95007 311 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 YBX3P16989 372 aaKnown RBP eCLIP13.37□□□□□ -0.272e-7■■□□□ 12.2
SKP2-209ENST00000620197 MX2P20592 715 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 DNAJB1P25685 340 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 USP4Q13107 963 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 SEMA3BQ13214 749 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 ITFG2Q969R8 447 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 DRC3Q9H069 523 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 ATXN10Q9UBB4 475 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 CAPN8A6NHC0 703 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 ERVK-10P10266 1014 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 GRM5P41594 1212 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 PHKA2P46019 1235 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 SPATA24Q86W54 205 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 CRYBG2Q8N1P7 616 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 SPATC1LQ9H0A9 340 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 SMARCAD1Q9H4L7 1026 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 DHX35Q9H5Z1 703 aaKnown RBP13.37□□□□□ -0.27
SKP2-209ENST00000620197 H0YJX3 145 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 FZD9O00144 591 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 TADA2AO75478 443 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 CRTAMO95727 393 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
SKP2-209ENST00000620197 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
SKP2-209ENST00000620197 CYP2C8P10632 490 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 PIK3R1P27986 724 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
SKP2-209ENST00000620197 EPHB1P54762 984 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 TRIP10Q15642 601 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 ZFP1Q6P2D0 407 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 CMC1Q7Z7K0 106 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 LSMEM2Q8N112 164 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 RP9Q8TA86 221 aaKnown RBP13.37□□□□□ -0.27
SKP2-209ENST00000620197 RDH11Q8TC12 318 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
SKP2-209ENST00000620197 CPB2Q96IY4 423 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 TMCO1Q9UM00 188 aa13.37□□□□□ -0.27
SKP2-209ENST00000620197 PPEF2O14830 753 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
SKP2-209ENST00000620197 POLBP06746 335 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 PSMB4P28070 264 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 RGS2P41220 211 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 RPL5P46777 297 aaKnown RBP13.36□□□□□ -0.27
SKP2-209ENST00000620197 IRF9Q00978 393 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ACVR1CQ8NER5 493 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
SKP2-209ENST00000620197 SARDHQ9UL12 918 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 RGSL1A5PLK6 1076 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
SKP2-209ENST00000620197 LTFP02788 710 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 MATKP42679 507 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 THOP1P52888 689 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 CEACAM7Q14002 265 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 LRRC36Q1X8D7 754 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 LCA5Q86VQ0 697 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 TNS4Q8IZW8 715 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ICA1LQ8NDH6 482 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ADCY4Q8NFM4 1077 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
SKP2-209ENST00000620197 MRPS26Q9BYN8 205 aaKnown RBP13.36□□□□□ -0.27
SKP2-209ENST00000620197 DPEP3Q9H4B8 488 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 IRAK4Q9NWZ3 460 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 COL1A2P08123 1366 aa13.36□□□□□ -0.27
SKP2-209ENST00000620197 AP2A1O95782 977 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 MS4A2Q01362 244 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 ZYG11AQ6WRX3 759 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 DSELQ8IZU8 1212 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 PELI3Q8N2H9 469 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 LRRC52Q8N7C0 313 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 PPP1R14CQ8TAE6 165 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 FERMT1Q9BQL6 677 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms