RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TMC6Q7Z403 805 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 KIAA0907Q7Z7F0 614 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 MMAAQ8IVH4 418 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 STK40Q8N2I9 435 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 FIBINQ8TAL6 211 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF419Q96HQ0 510 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 GABRG3Q99928 467 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 SELENOOQ9BVL4 669 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 DCLK3Q9C098 648 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CNOT8Q9UFF9 292 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 OR12D3Q9UGF7 316 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CAPN11Q9UMQ6 739 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 FCF1Q9Y324 198 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 TDRD6O60522 2096 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 EPG5Q9HCE0 2579 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 IGHV1OR15-9A0A0B4J2B8 117 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 DCDC2BA2VCK2 349 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 F5H5T6 163 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 APBB3O95704 486 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 CYBBP04839 570 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 EIF2DP41214 584 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 P2RY2P41231 377 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 DHPSP49366 369 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 TPMTP51580 245 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 IRX4P78413 519 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 MMRN1Q13201 1228 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 MEA1Q16626 185 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 FBXO43Q4G163 708 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 FILIP1LQ4L180 1135 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 C9orf64Q5T6V5 341 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ZC3H14Q6PJT7 736 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 UNC45BQ8IWX7 931 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 NPWQ8N729 165 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF653Q96CK0 615 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 EXOC2Q96KP1 924 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 NOX5Q96PH1 765 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 CDK5RAP1Q96SZ6 601 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 C6orf106Q9H6K1 298 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 TNRC6BQ9UPQ9 1833 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 PCNX2A6NKB5 2137 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 TMEM131Q92545 1883 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 FERP16591 822 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ADRA1BP35368 520 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 GJC1P36383 396 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 MRPS21P82921 87 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ARF5P84085 180 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF528Q3MIS6 628 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 DNAJC24Q6P3W2 148 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 MAMSTRQ6ZN01 415 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 VSTM4Q8IW00 320 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SYNPOQ8N3V7 929 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 AADATQ8N5Z0 425 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 C3orf20Q8ND61 904 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 GAB3Q8WWW8 586 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 CENPIQ92674 756 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 FAM129BQ96TA1 746 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SPON2Q9BUD6 331 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SALL4Q9UJQ4 1053 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ERVW-1Q9UQF0 538 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SHROOM3Q8TF72 1996 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 CHD5Q8TDI0 1954 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 RCCD1A6NED2 376 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SIGLEC16A6NMB1 481 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 CBX4O00257 560 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 MID1O15344 667 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 LRCH4O75427 683 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 DLDP09622 509 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 GPD1P21695 349 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SDC4P31431 198 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 RDXP35241 583 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF445P59923 1031 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 AMPD2Q01433 879 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ENPP2Q13822 863 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ASTE1Q2TB18 679 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 ACCSLQ4AC99 568 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 C1orf228Q6PIY5 440 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 WDR5BQ86VZ2 330 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 FRS2Q8WU20 508 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 PIGKQ92643 395 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 KLK6Q92876 244 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 TOE1Q96GM8 510 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 SMIM14Q96QK8 99 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 GPR174Q9BXC1 333 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 TM6SF2Q9BZW4 377 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 VPS51Q9UID3 782 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 GGT7Q9UJ14 662 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 DUSP10Q9Y6W6 482 aa5.86□□□□□ -1.47
CPNE3-208ENST00000614678 GOLGA4Q13439 2230 aaKnown RBP5.86□□□□□ -1.47
CPNE3-208ENST00000614678 PLXNA2O75051 1894 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 A0A1W2PP55 124 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 GIPC1O14908 333 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PAPSS2O95340 614 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 GLI1P08151 1106 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 GOT1P17174 413 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 OR1E1P30953 314 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PRKCIP41743 596 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 GALCP54803 685 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms