RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 ZNF639Q9UID6 485 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 PRAG1Q86YV5 1406 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 PRKAB2O43741 272 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 ECHS1P30084 290 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 ATXN1P54253 815 aaKnown RBP8.52□□□□□ -1.05
ALMS1-206ENST00000613296 TTC27Q6P3X3 843 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 DEPDC4Q8N2C3 294 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 OR2L3Q8NG85 312 aa8.52□□□□□ -1.05
ALMS1-206ENST00000613296 GFM1Q96RP9 751 aaKnown RBP8.52□□□□□ -1.05
ALMS1-206ENST00000613296 AFF2P51816 1311 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CYP2C8P10632 490 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 MLLT6P55198 1093 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 MRPS22P82650 360 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 TMEM62Q0P6H9 643 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 SYNPOQ8N3V7 929 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 HBS1LQ9Y450 684 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 OAS3Q9Y6K5 1087 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 MAST1Q9Y2H9 1570 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 DHFRP00374 187 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ZNF234Q14588 700 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 MGAT5BQ3V5L5 792 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 RAB43Q86YS6 212 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 FOXP4Q8IVH2 680 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ZIM3Q96PE6 472 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 EIF2AK1Q9BQI3 630 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 DNAJC11Q9NVH1 559 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CARD8Q9Y2G2 431 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ANKRD6Q9Y2G4 727 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CYP21A2P08686 494 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 LIFRP42702 1097 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CRKLP46109 303 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ARPC4P59998 168 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ZNF554Q86TJ5 538 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 OAFQ86UD1 273 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 OR2L8Q8NGY9 312 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 GREM2Q9H772 168 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 RDH8Q9NYR8 311 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 GPN3Q9UHW5 284 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ACOT9Q9Y305 439 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 BHMG1C9JSJ3 638 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 PHKG2P15735 406 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 HUNKP57058 714 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 TUBA1BP68363 451 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 DEFA5Q01523 94 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 SLC34A1Q06495 639 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 TUBA1AQ71U36 451 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 TRMT11Q7Z4G4 463 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CMTR2Q8IYT2 770 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 GMCL1Q96IK5 515 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 RNF146Q9NTX7 359 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 GMPPBQ9Y5P6 360 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 SH3BGRLO75368 114 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 N4BP2L1Q5TBK1 243 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 STRIP1Q5VSL9 837 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 SLC25A25Q6KCM7 469 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 FBXO39Q8N4B4 442 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ZNF540Q8NDQ6 660 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 MAFIPQ8WZ33 124 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 OSBP2Q969R2 916 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 FAM20AQ96MK3 541 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 KLHL5Q96PQ7 755 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 SUCOQ9UBS9 1254 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 RBMX2Q9Y388 322 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CYP27B1O15528 508 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 TYMPP19971 482 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ADSSP30520 456 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 POLD2P49005 469 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 C11orf63Q6NUN7 778 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 COL23A1Q86Y22 540 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 PTCD2Q8WV60 388 aaKnown RBP8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ZMYM5Q9UJ78 669 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ST3GAL5Q9UNP4 418 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 INVSQ9Y283 1065 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 TOP2BQ02880 1626 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ABCA5Q8WWZ7 1642 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 COMTP21964 271 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 EPHB2P29323 1055 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 GALCP54803 685 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 PLET1Q6UQ28 207 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ADGRG2Q8IZP9 1017 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ING5Q8WYH8 240 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 PCDHGB3Q9Y5G1 929 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 ARL5AQ9Y689 179 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 PSMD9O00233 223 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 SLC1A6P48664 564 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 NEK3P51956 506 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CDC42EP1Q00587 391 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 CSHL1Q14406 222 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 DEF8Q6ZN54 512 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 COL26A1Q96A83 441 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 GANQ9H2C0 597 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 VPS45Q9NRW7 570 aa8.51□□□□□ -1.05
ALMS1-206ENST00000613296 MAT2BQ9NZL9 334 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms