RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LRRC42Q9Y546 428 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CCDC189A1A4V9 331 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 GARTP22102 1010 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 MARSP56192 900 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 KIAA1841Q6NSI8 718 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CHPFQ8IZ52 775 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 SLC25A41Q8N5S1 370 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 UTP15Q8TED0 518 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 CXorf21Q9HAI6 301 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 SH3BP1Q9Y3L3 701 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 FOXN3O00409 490 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 ATP9BO43861 1147 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZNF549Q6P9A3 640 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 PIWIL4Q7Z3Z4 852 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 PCSK1NQ9UHG2 260 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 LGALS13Q9UHV8 139 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 V9GYQ6 96 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CYP26A1O43174 497 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CYP1A1P04798 512 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 FCER1AP12319 257 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CDC25AP30304 524 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ERFP50548 548 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 PITPNAQ00169 270 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZNF767PQ75MW2 155 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 C10orf107Q8IVU9 208 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 KATNAL2Q8IYT4 538 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 SNRPB2P08579 225 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 CHI3L1P36222 383 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 CCNG1P51959 295 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 PLEKHG6Q3KR16 790 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 OTOAQ7RTW8 1153 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 BTDP43251 543 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 KRT33BQ14525 404 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 IQCKQ8N0W5 287 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 OR2T34Q8NGX1 318 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 OR2T3Q8NH03 318 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 DPF3Q92784 378 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 EDC3Q96F86 508 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 RNF38Q9H0F5 515 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 NPHP3-ACAD11A0A0J9YXS1 232 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 GSTT2BP0CG30 244 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ETS2P15036 469 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 SLC5A3P53794 718 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 AUHQ13825 339 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 RBM48Q5RL73 367 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 FAM172AQ8WUF8 416 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ATL1Q8WXF7 558 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 BCL7BQ9BQE9 202 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 C1QTNF1Q9BXJ1 281 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 LMCD1Q9NZU5 365 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 MORF4L1Q9UBU8 362 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 KIF28PB7ZC32 967 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 PGRMC2O15173 223 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 GPD1P21695 349 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 TRIM23P36406 574 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 HNRNPFP52597 415 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 GEMP55040 296 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 LRRC38Q5VT99 294 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 KIF18BQ86Y91 864 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ASCC1Q8N9N2 400 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 ART4Q93070 314 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 LRRC10BA6NIK2 292 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 TPTEP56180 551 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 INSCQ1MX18 579 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ATXN7L3BQ96GX2 97 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ROGDIQ9GZN7 287 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 IRF2BPLQ9H1B7 796 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 MAN2B2Q9Y2E5 1009 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 SH3PXD2BA1X283 911 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 C7P10643 843 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 NMT1P30419 496 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 OR2B6P58173 313 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 SWI5Q1ZZU3 235 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 OTUD3Q5T2D3 398 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 ZNF572Q7Z3I7 529 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 TDRD1Q9BXT4 1180 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 TMEM138Q9NPI0 162 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 TAS2R7Q9NYW3 318 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 DENND3A2RUS2 1198 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 PABPC4LP0CB38 370 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 GJA9P57773 515 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 GRIK3Q13003 919 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 PSMD5Q16401 504 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 XRRA1Q6P2D8 792 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 MOXD1Q6UVY6 613 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 HIPK1Q86Z02 1210 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 CDCA5Q96FF9 252 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 CENPNQ96H22 339 aaPredicted RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 SCN8AQ9UQD0 1980 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 A0A087X0T9 212 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 DCXO43602 365 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 MAB21L1Q13394 359 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ZNF181Q2M3W8 571 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 GARNL3Q5VVW2 1013 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 SCARA5Q6ZMJ2 495 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 ENDOVQ8N8Q3 282 aaKnown RBP8.91□□□□□ -0.98
TTC28-208ENST00000612946 ACSS3Q9H6R3 686 aa8.91□□□□□ -0.98
TTC28-208ENST00000612946 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.91□□□□□ -0.98
TTC28-208ENST00000612946 GMIPQ9P107 970 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms