RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 UBE2Q1Q7Z7E8 422 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 C16orf71Q8IYS4 520 aaPredicted RBP4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 VPS52Q8N1B4 723 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 ADPRHL1Q8NDY3 354 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 TBATAQ96M53 351 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 PPP1R10Q96QC0 940 aaKnown RBP4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 PIMREGQ9BSJ6 248 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 IFT80Q9P2H3 777 aaPredicted RBP4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 HDAC6Q9UBN7 1215 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 CD207Q9UJ71 328 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 MAFFQ9ULX9 164 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 FRMD4BQ9Y2L6 1034 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 CRYL1Q9Y2S2 319 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 CACNA1IQ9P0X4 2223 aa4.31□□□□□ -1.72
RNU6-88P-201ENST00000606801 CYP2D7A0A087X1C5 515 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 FAM90A7PA6NKC0 464 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 FAM90A22PA8MWA6 464 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 FAM90A12PA8MX19 464 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 FAM90A23PA8MXZ1 464 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 NPHP1O15259 732 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 KLK10O43240 276 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 PKMP14618 531 aaKnown RBP4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 CPA1P15085 419 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 HOXB9P17482 250 aaPredicted RBP4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 C21orf58P58505 322 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 SSBP2P81877 361 aaPredicted RBP4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 ALKBH1Q13686 389 aaKnown RBP4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 ZNF268Q14587 947 aaPredicted RBP4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 ANKRD1Q15327 319 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 GPR162Q16538 588 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 ARL13AQ5H913 290 aaPredicted RBP4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 COLEC12Q5KU26 742 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 WDR45BQ5MNZ6 344 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 SH2D4BQ5SQS7 431 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 MIS18BP1Q6P0N0 1132 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 SLC30A9Q6PML9 568 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 UEVLDQ8IX04 471 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 TMEM217Q8N7C4 229 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 USP38Q8NB14 1042 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 VOPP1Q96AW1 172 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 RNFT2Q96EX2 444 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 CLSTN3Q9BQT9 956 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 CTDSP1Q9GZU7 261 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 ERVK-5Q9HDB9 667 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 Q9N2J8 555 aa4.3□□□□□ -1.72
RNU6-88P-201ENST00000606801 TCRBV7S3A2A0A539 114 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 CERS1P27544 350 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 EPHB2P29323 1055 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 TYK2P29597 1187 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 ARHGAP25P42331 645 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 HSF1Q00613 529 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 ALFQ53S48 1182 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 UBAP2Q5T6F2 1119 aaKnown RBP4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 LIPMQ5VYY2 423 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 ATG16L1Q676U5 607 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 NAPEPLDQ6IQ20 393 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 ANO7Q6IWH7 933 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 SLC18B1Q6NT16 456 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 DENND1BQ6P3S1 775 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 YTHDF3Q7Z739 585 aaKnown RBP4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 NEK8Q86SG6 692 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 BCAS4Q8TDM0 211 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 HTRA1Q92743 480 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 STAMQ92783 540 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 SIGLEC11Q96RL6 698 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 SCNM1Q9BWG6 230 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 TRIM31Q9BZY9 425 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 SEMA4CQ9C0C4 833 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 ACAD9Q9H845 621 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 ARL15Q9NXU5 204 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 AFG3L2Q9Y4W6 797 aa4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 COL3A1P02461 1466 aaPredicted RBP4.29□□□□□ -1.72
RNU6-88P-201ENST00000606801 CXorf65A6NEN9 183 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 RNF8O76064 485 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 CTSAP10619 480 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 TFEBP19484 476 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 MTNR1AP48039 350 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 MRPS21P82921 87 aaKnown RBP4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 ARHGAP8P85298 464 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 SRSF4Q08170 494 aaKnown RBP4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 STIM1Q13586 685 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 PKP1Q13835 747 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 ASPHD1Q5U4P2 390 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 MMS22LQ6ZRQ5 1243 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 BRSK2Q8IWQ3 736 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 SRRM1Q8IYB3 904 aaKnown RBP4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 ESX1Q8N693 406 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 LSM14AQ8ND56 463 aaKnown RBP4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 HVCN1Q96D96 273 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 FAM118BQ9BPY3 351 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 GPR63Q9BZJ6 419 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 STN1Q9H668 368 aaKnown RBP4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 WASH6PQ9NQA3 447 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 TMEM184CQ9NVA4 438 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 HSF4Q9ULV5 492 aa4.28□□□□□ -1.72
RNU6-88P-201ENST00000606801 TRBV5-3A0A0A0MS03 114 aa4.27□□□□□ -1.73
RNU6-88P-201ENST00000606801 A0A0G2JK05 382 aa4.27□□□□□ -1.73
RNU6-88P-201ENST00000606801 E5RJQ4 531 aa4.27□□□□□ -1.73
RNU6-88P-201ENST00000606801 NEURL1O76050 574 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms