RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RPS6KA6Q9UK32 745 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PCDHGC3Q9UN70 934 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 MRPS7Q9Y2R9 242 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 MAGED1Q9Y5V3 778 aaPredicted RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ABCB11O95342 1321 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 A0A087WXM4 84 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 A0A0G2JMP0 313 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 A6NCN8 305 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 H3BMM5 538 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 H3BNH8 94 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF263O14978 683 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GMDSO60547 372 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ATE1O95260 518 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 CTDNEP1O95476 244 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 BMP1P13497 986 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ENO3P13929 434 aaPredicted RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ITIH2P19823 946 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GNALP38405 381 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 TSPAN5P62079 268 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GCNT1Q02742 428 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 TEFQ10587 303 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 LRRC14Q15048 493 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 TBCCQ15814 346 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 TCP11X2Q5H9J9 407 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 RSBN1Q5VWQ0 802 aaPredicted RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GGT6Q6P531 493 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 SLC16A12Q6ZSM3 486 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GPRIN3Q6ZVF9 776 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PLEKHM3Q6ZWE6 761 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ERO1BQ86YB8 467 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ULK2Q8IYT8 1036 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 EID3Q8N140 333 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PIK3C3Q8NEB9 887 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 SRFBP1Q8NEF9 429 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 NOL6Q9H6R4 1146 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 IFT46Q9NQC8 304 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 RPRD1BQ9NQG5 326 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PRDM11Q9NQV5 511 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 FBXO28Q9NVF7 368 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GLTPQ9NZD2 209 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 SLC24A2Q9UI40 661 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 TFR2Q9UP52 801 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 GDAQ9Y2T3 454 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 UGT2A1Q9Y4X1 527 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 UTYO14607 1347 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 SF3B1O75533 1304 aaKnown RBP eCLIP9.04□□□□□ -0.963e-6■■■■■ 44.6
COMMD3-215ENST00000602574 COL15A1P39059 1388 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 LEUTXA8MZ59 168 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 TM9SF1O15321 606 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ALDH1A2O94788 518 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 URODP06132 367 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 UGT2B4P06133 528 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 TRAPPC2P0DI81 140 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 TRAPPC2BP0DI82 140 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 NCF2P19878 526 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-215ENST00000602574 NOS3P29474 1203 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 CDC25AP30304 524 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 KCNQ4P56696 695 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 GPX6P59796 221 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 DCDC1P59894 354 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 CCNA1P78396 465 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 COTL1Q14019 142 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 PTPAQ15257 358 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 TRIP10Q15642 601 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ASIC2Q16515 512 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 PDK4Q16654 411 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 SPATS1Q496A3 300 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 UBAP2Q5T6F2 1119 aaKnown RBP9.04□□□□□ -0.96
COMMD3-215ENST00000602574 HES5Q5TA89 166 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 PRSS42Q7Z5A4 293 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 GALNT12Q8IXK2 581 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 CADM2Q8N3J6 435 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 DPP10Q8N608 796 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 OR52K1Q8NGK4 314 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF507Q8TCN5 953 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 DENND1AQ8TEH3 1009 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 C7orf43Q8WVR3 580 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ATP6V1E2Q96A05 226 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ACDQ96AP0 544 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 FEM1CQ96JP0 617 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 CYTH2Q99418 400 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 PLIN2Q99541 437 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 MKNK1Q9BUB5 465 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 BCL2L14Q9BZR8 327 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF556Q9HAH1 456 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 TOR4AQ9NXH8 423 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 NYAP2Q9P242 653 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF624Q9P2J8 865 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-215ENST00000602574 RWDD2AQ9UIY3 292 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ADAMTS6Q9UKP5 1117 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 MAN2B2Q9Y2E5 1009 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 PTCH2Q9Y6C5 1203 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 USP6P35125 1406 aa9.04□□□□□ -0.96
COMMD3-215ENST00000602574 ARHGAP23Q9P227 1491 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms