RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 STK19P49842 368 aaPredicted RBP10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 CCR5P51681 352 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 GCNT1Q02742 428 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 ARID5BQ14865 1188 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 TMPRSS12Q86WS5 348 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 AADATQ8N5Z0 425 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 EID2Q8N6I1 236 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 RNF34Q969K3 372 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 SERAC1Q96JX3 654 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 BTN2A3PQ96KV6 586 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 TIGD1Q96MW7 591 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 DCBLD2Q96PD2 775 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 TRIM62Q9BVG3 475 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 LAMA5O15230 3695 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 ZZEF1O43149 2961 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 SYNJ2BP-COX16A0A087WUM0 186 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 A0A1W2PR77 199 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 BICDL2A1A5D9 508 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 E9PAM4 449 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 WNT9AO14904 365 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 YKT6O15498 198 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 THAP12O43422 761 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 RFPL3O75679 317 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 PDGFRAP16234 1089 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 HNF1BP35680 557 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 RPL34P49207 117 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 ARRB1P49407 418 aaPredicted RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 ADPRHP54922 357 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 STX17P56962 302 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 SULT2A1Q06520 285 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 BNIP3Q12983 259 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC12A1Q13621 1099 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 KCNJ12Q14500 433 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 ACCSLQ4AC99 568 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 C6orf118Q5T5N4 469 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 DENND1BQ6P3S1 775 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 PRPF39Q86UA1 669 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 SAP25Q8TEE9 199 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 NELFBQ8WX92 580 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 KREMEN1Q96MU8 473 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 MED15Q96RN5 788 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 POPDC2Q9HBU9 364 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 UBE2TQ9NPD8 197 aaPredicted RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 COX16Q9P0S2 106 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 MAN1B1Q9UKM7 699 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 TPX2Q9ULW0 747 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 PCDHGA1Q9Y5H4 931 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
CHMP2A-202ENST00000596708 KCNU1A8MYU2 1149 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 E5RJQ4 531 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 TLR4O00206 839 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 AFPP02771 609 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 C1SP09871 688 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 CDK4P11802 303 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 VAV1P15498 845 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 ZNF18P17022 549 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 MZF1P28698 734 aaPredicted RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 GNA15P30679 374 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 MAT2AP31153 395 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 CLDN6P56747 220 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 YWHAZP63104 245 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 ELAVL3Q14576 367 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 SHBQ15464 509 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 RABGAP1LQ5R372 815 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 TTI2Q6NXR4 508 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 BEND5Q7L4P6 421 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 CIR1Q86X95 450 aaPredicted RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 CREBRFQ8IUR6 639 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 CCAR2Q8N163 923 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 STK32AQ8WU08 396 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 ZNF606Q8WXB4 792 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 OR8D1Q8WZ84 308 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 PPP1R9BQ96SB3 815 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 INTS2Q9H0H0 1204 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 THAP9Q9H5L6 903 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 FAM204AQ9H8W3 233 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 SLC25A13Q9UJS0 675 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 CTNND2Q9UQB3 1225 aa10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHMP2A-202ENST00000596708 A0A1B0GVM2 712 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 TCAF2A6NFQ2 919 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 BNIP3LO60238 219 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 MAGEC1O60732 1142 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 GNA14O95837 355 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 SLC2A3P11169 496 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 EPHA8P29322 1005 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 DRD3P35462 400 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 USP8P40818 1118 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 ABCG1P45844 678 aa10.88□□□□□ -0.67
CHMP2A-202ENST00000596708 OXCT1P55809 520 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms