RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 SERPINA13PQ6UXR4 307 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 CEP68Q76N32 757 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 TRMT11Q7Z4G4 463 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 PGBD3Q8N328 593 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 UCMAQ8WVF2 138 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 GAB3Q8WWW8 586 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 C1orf74Q96LT6 269 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 MKRN2Q9H000 416 aaKnown RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 POLMQ9NP87 494 aaPredicted RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 ABHD10Q9NUJ1 306 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 SPTLC3Q9NUV7 552 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 NDFIP2Q9NV92 336 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
VMP1-211ENST00000591315 OR12D3Q9UGF7 316 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 PCSK1NQ9UHG2 260 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 MBD1Q9UIS9 605 aaPredicted RBP11.86□□□□□ -0.51
VMP1-211ENST00000591315 NEU3Q9UQ49 428 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 ERVW-1Q9UQF0 538 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 OR51B4Q9Y5P0 310 aa11.86□□□□□ -0.51
VMP1-211ENST00000591315 A0A0D9SEW6 157 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 CCDC163A0A0D9SF12 145 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 TIMM44O43615 452 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 LRIG2O94898 1065 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 GLDCP23378 1020 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 CDH4P55283 916 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 TRIM14Q14142 442 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 ARID5BQ14865 1188 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 CCDC6Q16204 474 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 MAP7D1Q3KQU3 841 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
VMP1-211ENST00000591315 RWDD4Q6NW29 188 aaKnown RBP11.85□□□□□ -0.51
VMP1-211ENST00000591315 KIAA1324Q6UXG2 1013 aaKnown RBP11.85□□□□□ -0.51
VMP1-211ENST00000591315 CYP4V2Q6ZWL3 525 aaPredicted RBP11.85□□□□□ -0.51
VMP1-211ENST00000591315 DRC7Q8IY82 874 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 DEFB119Q8N690 84 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 OR7D4Q8NG98 312 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 MRGPRX1Q96LB2 322 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 PSMB7Q99436 277 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 OSBPL2Q9H1P3 480 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 PRSS16Q9NQE7 514 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 TBC1D30Q9Y2I9 924 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 PAXBP1Q9Y5B6 917 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 ACTL7AQ9Y615 435 aa11.85□□□□□ -0.51
VMP1-211ENST00000591315 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 AKR1B15C9JRZ8 316 aaPredicted RBP11.84□□□□□ -0.51
VMP1-211ENST00000591315 CLDN11O75508 207 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 ALDH1A2O94788 518 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 MT-CO1P00395 513 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 CYP1A2P05177 515 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 ATP5BP06576 529 aaKnown RBP11.84□□□□□ -0.51
VMP1-211ENST00000591315 RHOCP08134 193 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 MIPP30301 263 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 ACVRL1P37023 503 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 COPAP53621 1224 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 ECT2LQ008S8 904 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 SCAPQ12770 1279 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 CAMK2GQ13555 558 aaPredicted RBP11.84□□□□□ -0.51
VMP1-211ENST00000591315 PLK5Q496M5 336 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 TXNRD3NBQ6F5E7 133 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 PPP1R2P3Q6NXS1 205 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 LRRC31Q6UY01 552 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 VPS36Q86VN1 386 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 NLRP14Q86W24 1093 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 CCDC117Q8IWD4 279 aaPredicted RBP11.84□□□□□ -0.51
VMP1-211ENST00000591315 NETO2Q8NC67 525 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 NTAN1Q96AB6 310 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 NUP85Q9BW27 656 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 DUSP15Q9H1R2 295 aaPredicted RBP11.84□□□□□ -0.51
VMP1-211ENST00000591315 NHEJ1Q9H9Q4 299 aaPredicted RBP11.84□□□□□ -0.51
VMP1-211ENST00000591315 PLA2G4CQ9UP65 541 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 CHD5Q8TDI0 1954 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 PI4KAP42356 2102 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 CEP192Q8TEP8 1941 aa11.84□□□□□ -0.51
VMP1-211ENST00000591315 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 K7ERQ8 282 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 AKR1B10O60218 316 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 SYNCRIPO60506 623 aaKnown RBP11.83□□□□□ -0.52
VMP1-211ENST00000591315 SIN3BO75182 1162 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 LRCH4O75427 683 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 MYBL1P10243 752 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 IL1R2P27930 398 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 OR1E1P30953 314 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 P2RY2P41231 377 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 PLK1P53350 603 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 STARD3Q14849 445 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 SLC18A3Q16572 532 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 ARL13BQ3SXY8 428 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 USP39Q53GS9 565 aaKnown RBP11.83□□□□□ -0.52
VMP1-211ENST00000591315 C9orf64Q5T6V5 341 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 LINGO4Q6UY18 593 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 TMPRSS6Q8IU80 811 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
VMP1-211ENST00000591315 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
VMP1-211ENST00000591315 KCTD15Q96SI1 283 aaPredicted RBP11.83□□□□□ -0.52
VMP1-211ENST00000591315 SPON2Q9BUD6 331 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms