RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 GRAP2O75791 330 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 ADH1BP00325 375 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 PDGFRAP16234 1089 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 C5AR1P21730 350 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 SLC8A1P32418 973 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 BNC1Q01954 994 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 MYL5Q02045 173 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 NME3Q13232 169 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 AUHQ13825 339 aaKnown RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 SKOR2Q2VWA4 1001 aaPredicted RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 PTPN20Q4JDL3 420 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 TCP11X2Q5H9J9 407 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 MIIPQ5JXC2 388 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 DBX2Q6ZNG2 339 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 SND1Q7KZF4 910 aaKnown RBP eCLIP14.8□□□□□ -0.04
MBD1-220ENST00000589758 GLRX5Q86SX6 157 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 MMAAQ8IVH4 418 aaKnown RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 AOPEPQ8N6M6 819 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 TMEM35BQ8NCS4 154 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 SETD7Q8WTS6 366 aaKnown RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 GATA6Q92908 595 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 PTPRN2Q92932 1015 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 RPL10LQ96L21 214 aaKnown RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 FAM129BQ96TA1 746 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 TMEM121BQ9BXQ6 578 aaPredicted RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 IL21RQ9HBE5 538 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 TAB2Q9NYJ8 693 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 ADAMTS1Q9UHI8 967 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 AJAP1Q9UKB5 411 aaPredicted RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 PCOLCE2Q9UKZ9 415 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 STAP1Q9ULZ2 295 aa14.8□□□□□ -0.04
MBD1-220ENST00000589758 APOBEC2Q9Y235 224 aaKnown RBP14.8□□□□□ -0.04
MBD1-220ENST00000589758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 FLRT2O43155 660 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 CBFA2T3O75081 653 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 F9P00740 461 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 IGHV4-34P06331 123 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 GOT1P17174 413 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 EEF1GP26641 437 aaKnown RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 MZF1P28698 734 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 CDH5P33151 784 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 GALCP54803 685 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 RACK1P63244 317 aaKnown RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 ZNF177Q13360 481 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 RAPGEF1Q13905 1077 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 ELAVL3Q14576 367 aaKnown RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 DRAP1Q14919 205 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 NUMA1Q14980 2115 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 KIF19Q2TAC6 998 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 ACBD5Q5T8D3 534 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 FBXL22Q6P050 247 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 RAB44Q7Z6P3 723 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 ADAT2Q7Z6V5 191 aaKnown RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 CIR1Q86X95 450 aaPredicted RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 STK40Q8N2I9 435 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 OR2T34Q8NGX1 318 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 ADAMTS14Q8WXS8 1223 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 SKA1Q96BD8 255 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 CDC6Q99741 560 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 NAT10Q9H0A0 1025 aaKnown RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 VPS16Q9H269 839 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 NEUROG2Q9H2A3 272 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.79□□□□□ -0.04
MBD1-220ENST00000589758 VANGL2Q9ULK5 521 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 ANKRD6Q9Y2G4 727 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 FNDC3AQ9Y2H6 1198 aaKnown RBP14.79□□□□□ -0.04
MBD1-220ENST00000589758 PAXBP1Q9Y5B6 917 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 SNX11Q9Y5W9 270 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 HS3ST4Q9Y661 456 aa14.79□□□□□ -0.04
MBD1-220ENST00000589758 MAP1BP46821 2468 aaKnown RBP14.78□□□□□ -0.04
MBD1-220ENST00000589758 A0A1W2PPC4 97 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 FAM47DPA6NHR8 397 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 DFNA5O60443 496 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 PAGE1O75459 146 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 CLDN11O75508 207 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 RNASEH2AO75792 299 aaKnown RBP14.78□□□□□ -0.04
MBD1-220ENST00000589758 IL1BP01584 269 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 FTH1P19P0C7X4 201 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 PNMA6AP0CW24 399 aaPredicted RBP14.78□□□□□ -0.04
MBD1-220ENST00000589758 CYP11B1P15538 503 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 SCNN1AP37088 669 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 GABRB2P47870 512 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 STK19P49842 368 aaPredicted RBP14.78□□□□□ -0.04
MBD1-220ENST00000589758 KCNMA1Q12791 1236 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 C5orf22Q49AR2 442 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 BRMS1LQ5PSV4 323 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 KLHDC7AQ5VTJ3 777 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 CXorf57Q6NSI4 855 aaKnown RBP14.78□□□□□ -0.04
MBD1-220ENST00000589758 DPY19L2P1Q6NXN4 242 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 NCEH1Q6PIU2 408 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 DSG4Q86SJ6 1040 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 CHCHD4Q8N4Q1 142 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 MSANTD4Q8NCY6 345 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 RHBDD1Q8TEB9 315 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 IGSF8Q969P0 613 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 C18orf8Q96DM3 657 aa14.78□□□□□ -0.04
MBD1-220ENST00000589758 PGAP3Q96FM1 320 aaPredicted RBP14.78□□□□□ -0.04
MBD1-220ENST00000589758 SPAG5Q96R06 1193 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms