RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 OR2T34Q8NGX1 318 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 BAHD1Q8TBE0 780 aaPredicted RBP12.6□□□□□ -0.39
VAT1-206ENST00000589709 GANCQ8TET4 914 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 SETD7Q8WTS6 366 aaKnown RBP12.6□□□□□ -0.39
VAT1-206ENST00000589709 RNF34Q969K3 372 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 IGSF8Q969P0 613 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 CDC6Q99741 560 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 TUBGCP2Q9BSJ2 902 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 AJAP1Q9UKB5 411 aaPredicted RBP12.6□□□□□ -0.39
VAT1-206ENST00000589709 ZMIZ1Q9ULJ6 1067 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 APOBEC2Q9Y235 224 aaKnown RBP12.6□□□□□ -0.39
VAT1-206ENST00000589709 ANKRD6Q9Y2G4 727 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 CEP83Q9Y592 693 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
VAT1-206ENST00000589709 A0A1W2PP55 124 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 A0A1W2PPC4 97 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 VILLO15195 856 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 PCDHGA12O60330 932 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 DFNA5O60443 496 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 DAB1O75553 588 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 GRAP2O75791 330 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 ADH1BP00325 375 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 ERBB2P04626 1255 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 FTH1P19P0C7X4 201 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 PDGFRAP16234 1089 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 GOT1P17174 413 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 MZF1P28698 734 aaPredicted RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 SCNN1AP37088 669 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 CTSKP43235 329 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 CCR5P51681 352 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 ELAVL3Q14576 367 aaKnown RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 MIIPQ5JXC2 388 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 CXorf57Q6NSI4 855 aaKnown RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 FRS2Q8WU20 508 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 FAM131CQ96AQ9 280 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 ALG14Q96F25 216 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 RPL10LQ96L21 214 aaKnown RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 RPRD1AQ96P16 312 aaPredicted RBP12.59□□□□□ -0.39
VAT1-206ENST00000589709 NPY6RQ99463 290 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 OMDQ99983 421 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 FEM1AQ9BSK4 669 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 SERGEFQ9UGK8 458 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 DACH1Q9UI36 760 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
VAT1-206ENST00000589709 SYNJ2BP-COX16A0A087WUM0 186 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 M0QYT0 321 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 ATP9BO43861 1147 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 PAGE1O75459 146 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 CLDN11O75508 207 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 F9P00740 461 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 GABRB2P47870 512 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 CXCR3P49682 368 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 STK19P49842 368 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 KCNMA1Q12791 1236 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 NME3Q13232 169 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 ZNF177Q13360 481 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 DRAP1Q14919 205 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 BRMS1LQ5PSV4 323 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 ACBD5Q5T8D3 534 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 KLHDC7AQ5VTJ3 777 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 NCEH1Q6PIU2 408 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.4
VAT1-206ENST00000589709 SLCO6A1Q86UG4 719 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 STK40Q8N2I9 435 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 AADATQ8N5Z0 425 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 RHBDD1Q8TEB9 315 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 SKA1Q96BD8 255 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 PGAP3Q96FM1 320 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 SPAG5Q96R06 1193 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 ACE2Q9BYF1 805 aaPredicted RBP12.58□□□□□ -0.4
VAT1-206ENST00000589709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.4
VAT1-206ENST00000589709 COX16Q9P0S2 106 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 OR51B4Q9Y5P0 310 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 HS3ST4Q9Y661 456 aa12.58□□□□□ -0.4
VAT1-206ENST00000589709 FAM47DPA6NHR8 397 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 H0Y8X5 98 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 SLC7A4O43246 635 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 DKK1O94907 266 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 IL1BP01584 269 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 CAPNS1P04632 268 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 PNMA6AP0CW24 399 aaPredicted RBP12.57□□□□□ -0.4
VAT1-206ENST00000589709 CYP11B1P15538 503 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 EEF1GP26641 437 aaKnown RBP12.57□□□□□ -0.4
VAT1-206ENST00000589709 GRK6P43250 576 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 PSMD8P48556 350 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 CCT8P50990 548 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 CDH4P55283 916 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 KCNT1Q5JUK3 1230 aa12.57□□□□□ -0.4
VAT1-206ENST00000589709 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
VAT1-206ENST00000589709 LRSAM1Q6UWE0 723 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms