RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 METTL12A8MUP2 240 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 CLDN11O75508 207 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 MMP8P22894 467 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 ACSL1P33121 698 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
TPM4-206ENST00000587201 STK19P49842 368 aaPredicted RBP18.22■□□□□ 0.51
TPM4-206ENST00000587201 PLK1P53350 603 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 CDH4P55283 916 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 C5orf22Q49AR2 442 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 LRRC31Q6UY01 552 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 ARCQ7LC44 396 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 EMC1Q8N766 993 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 GANCQ8TET4 914 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 BTBD1Q9H0C5 482 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 RSPH9Q9H1X1 276 aaPredicted RBP18.22■□□□□ 0.51
TPM4-206ENST00000587201 CAPN10Q9HC96 672 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 SEPT11Q9NVA2 429 aaKnown RBP18.22■□□□□ 0.51
TPM4-206ENST00000587201 NCKAP1Q9Y2A7 1128 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 SNX10Q9Y5X0 201 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 ITIH6Q6UXX5 1313 aa18.22■□□□□ 0.51
TPM4-206ENST00000587201 I6L893 689 aaPredicted RBP18.21■□□□□ 0.51
TPM4-206ENST00000587201 CNTN5O94779 1100 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 KCNK5O95279 499 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 SYPP08247 313 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 ADRB1P08588 477 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 C7P10643 843 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 UNGP13051 313 aaPredicted RBP18.21■□□□□ 0.51
TPM4-206ENST00000587201 NSFP46459 744 aaKnown RBP18.21■□□□□ 0.51
TPM4-206ENST00000587201 C9orf64Q5T6V5 341 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 OR52K2Q8NGK3 314 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 DNASE2BQ8WZ79 361 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 PCDHB18PQ96TA0 734 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 TMPRSS4Q9NRS4 437 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 SLC25A13Q9UJS0 675 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 SCML1Q9UN30 329 aa18.21■□□□□ 0.51
TPM4-206ENST00000587201 SPTBN2O15020 2390 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ARHGAP33O14559 1287 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 TEX33O43247 280 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 SEMA4FO95754 770 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ZNF165P49910 485 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 NOVA1P51513 510 aaKnown RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 ATP11AP98196 1134 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 SFSWAPQ12872 951 aaKnown RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 CLEC16AQ2KHT3 1053 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ALFQ53S48 1182 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ACBD5Q5T8D3 534 aaPredicted RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 PSAPL1Q6NUJ1 521 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 LRSAM1Q6UWE0 723 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 BNIPLQ7Z465 357 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 FAM131BQ86XD5 332 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 MMAAQ8IVH4 418 aaKnown RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 HDDC3Q8N4P3 179 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ZCCHC9Q8N567 271 aaKnown RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 RXFP2Q8WXD0 754 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 SNX19Q92543 992 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 PTPRN2Q92932 1015 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ALG14Q96F25 216 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 C1orf74Q96LT6 269 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 FEM1AQ9BSK4 669 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 MUC3BQ9H195 1237 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 PCED1AQ9H1Q7 454 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 PABPC3Q9H361 631 aaKnown RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 C6orf106Q9H6K1 298 aaPredicted RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 SGK2Q9HBY8 427 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 ADAM22Q9P0K1 906 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 EIF2B4Q9UI10 523 aaKnown RBP18.2■□□□□ 0.5
TPM4-206ENST00000587201 VPS28Q9UK41 221 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 TBC1D30Q9Y2I9 924 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 PI4KAP42356 2102 aa18.2■□□□□ 0.5
TPM4-206ENST00000587201 A0A1B0GTW7 788 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 E9PAM4 449 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 MID1O15344 667 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 SRGAP2O75044 1071 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 RHOCP08134 193 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 CCDC172P0C7W6 258 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 SDC4P31431 198 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 CST6Q15828 149 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 CDO1Q16878 200 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 ACCSLQ4AC99 568 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 FILIP1LQ4L180 1135 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 ZNF683Q8IZ20 524 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 STK40Q8N2I9 435 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 JOSD2Q8TAC2 188 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 HAPLN3Q96S86 360 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 AGPAT1Q99943 283 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 SELENOOQ9BVL4 669 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 RTN4Q9NQC3 1192 aaKnown RBP18.19■□□□□ 0.5
TPM4-206ENST00000587201 FBXL12Q9NXK8 326 aa18.19■□□□□ 0.5
TPM4-206ENST00000587201 NCOR2Q9Y618 2525 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 A0A1W2PP55 124 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 DRGXA6NNA5 263 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 OPHN1O60890 802 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 ENDOD1O94919 500 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 GJB6O95452 261 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 CALB1P05937 261 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 KRT3P12035 628 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 VAV1P15498 845 aa18.18■□□□□ 0.5
TPM4-206ENST00000587201 FERP16591 822 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms