RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SIM2Q14190 667 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-205ENST00000586477 ANO4Q32M45 955 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 ZNF569Q5MCW4 686 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 CHSY1Q86X52 802 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 CCDC117Q8IWD4 279 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-205ENST00000586477 FAM217AQ8IXS0 508 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 CCDC33Q8N5R6 958 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 CAMKK1Q8N5S9 505 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 ARFGAP1Q8N6T3 406 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 CCDC185Q8N715 623 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 IL17RCQ8NAC3 791 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 RBM41Q96IZ5 413 aaKnown RBP16.59■□□□□ 0.25
ATG4D-205ENST00000586477 SNRNP25Q9BV90 132 aaKnown RBP16.59■□□□□ 0.25
ATG4D-205ENST00000586477 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATG4D-205ENST00000586477 STIM2Q9P246 746 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 OR12D3Q9UGF7 316 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 GMEB2Q9UKD1 530 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 PCDHA3Q9Y5H8 950 aa16.59■□□□□ 0.25
ATG4D-205ENST00000586477 USP27XA6NNY8 438 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 ZNF487B1APH4 448 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 H3BRJ5 948 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 SGK1O00141 431 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 CACNG3O60359 315 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 ADAM23O75077 832 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 APODP05090 189 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 CISD3P0C7P0 127 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 RARAP10276 462 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 CNR2P34972 360 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 TNFRSF4P43489 277 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 RWDD2BP57060 319 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 GNG11P61952 73 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 MRPS21P82921 87 aaKnown RBP16.58■□□□□ 0.24
ATG4D-205ENST00000586477 KRT81Q14533 505 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 PUM1Q14671 1186 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATG4D-205ENST00000586477 RPS6KA1Q15418 735 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 DPYSL2Q16555 572 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 PRR23BQ6ZRT6 265 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 TPGS1Q6ZTW0 290 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 KATNAL2Q8IYT4 538 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 ALLCQ8N6M5 410 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 KCTD6Q8NC69 237 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 GAB3Q8WWW8 586 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 HSPH1Q92598 858 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 ACDQ96AP0 544 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 DHX35Q9H5Z1 703 aaKnown RBP16.58■□□□□ 0.24
ATG4D-205ENST00000586477 EBF1Q9UH73 591 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 MMP17Q9ULZ9 603 aa16.58■□□□□ 0.24
ATG4D-205ENST00000586477 NEDD8-MDP1E9PL57 170 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 FGF10O15520 208 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-205ENST00000586477 ZRANB2O95218 330 aaKnown RBP eCLIP16.57■□□□□ 0.24
ATG4D-205ENST00000586477 FTCDO95954 541 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 TYRP14679 529 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 TIE1P35590 1138 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 GJC1P36383 396 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 HCAR3P49019 387 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 COPS2P61201 443 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 SMTNL2Q2TAL5 461 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 MPPE1Q53F39 396 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 MS4A13Q5J8X5 152 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 MPP7Q5T2T1 576 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 MEI1Q5TIA1 1274 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 LAIR1Q6GTX8 287 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 DGLUCYQ7Z3D6 616 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 RCOR2Q8IZ40 523 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 FAM160A2Q8N612 972 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-205ENST00000586477 TERB1Q8NA31 727 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 TXNDC5Q8NBS9 432 aaKnown RBP16.57■□□□□ 0.24
ATG4D-205ENST00000586477 HJURPQ8NCD3 748 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-205ENST00000586477 EXD1Q8NHP7 514 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 HES6Q96HZ4 224 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 PEBP4Q96S96 227 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 BBS2Q9BXC9 721 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 SIK2Q9H0K1 926 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 CATSPERBQ9H7T0 1116 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 PLK2Q9NYY3 685 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 PPARGC1AQ9UBK2 798 aaKnown RBP16.57■□□□□ 0.24
ATG4D-205ENST00000586477 FBXO10Q9UK96 956 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 HS3ST4Q9Y661 456 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 PLXND1Q9Y4D7 1925 aa16.57■□□□□ 0.24
ATG4D-205ENST00000586477 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-205ENST00000586477 PRRT4C9JH25 899 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 GFRA2O00451 464 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 AXIN1O15169 862 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 KLF8O95600 359 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-205ENST00000586477 APBB3O95704 486 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 PENKP01210 267 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-205ENST00000586477 KRT1P04264 644 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 TNNT1P13805 278 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 TACR2P21452 398 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 IL1R2P27930 398 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 CDH6P55285 790 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 TAS2R40P59535 323 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 AUHQ13825 339 aaKnown RBP16.56■□□□□ 0.24
ATG4D-205ENST00000586477 CRY1Q16526 586 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 RSPO4Q2I0M5 234 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-205ENST00000586477 PPP6R3Q5H9R7 873 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-205ENST00000586477 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
ATG4D-205ENST00000586477 PIK3R6Q5UE93 754 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms