RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 TMEM248Q9NWD8 314 aa13.71□□□□□ -0.21
CHAF1A-202ENST00000585371 SPATA6Q9NWH7 488 aaPredicted RBP13.71□□□□□ -0.21
CHAF1A-202ENST00000585371 CWC15Q9P013 229 aaKnown RBP13.71□□□□□ -0.21
CHAF1A-202ENST00000585371 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
CHAF1A-202ENST00000585371 CAPN6Q9Y6Q1 641 aa13.71□□□□□ -0.21
CHAF1A-202ENST00000585371 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
CHAF1A-202ENST00000585371 CKAP5Q14008 2032 aa13.71□□□□□ -0.22
CHAF1A-202ENST00000585371 MACROD2A1Z1Q3 448 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 C3orf70A6NLC5 250 aaPredicted RBP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 CREB3O43889 395 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 APODP05090 189 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 CD48P09326 243 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 PABPC1P11940 636 aaKnown RBP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 RHOQP17081 205 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 GOT1P17174 413 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 MZF1P28698 734 aaPredicted RBP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 HTR7P34969 479 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 HCAR3P49019 387 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 PLK1P53350 603 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 DPYSQ14117 519 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 HADHQ16836 314 aaKnown RBP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 FUT11Q495W5 492 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 EMC10Q5UCC4 262 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 LRRC38Q5VT99 294 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 PKN3Q6P5Z2 889 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 ANKS1BQ7Z6G8 1248 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 ADIPOR2Q86V24 386 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 MAML2Q8IZL2 1156 aaPredicted RBP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 APCDD1Q8J025 514 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 RNF10Q8N5U6 811 aaKnown RBP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 HSPH1Q92598 858 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 RETREG1Q9H6L5 497 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 GGA2Q9UJY4 613 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 STARD13Q9Y3M8 1113 aa13.7□□□□□ -0.22
CHAF1A-202ENST00000585371 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 H0Y626 953 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 EEF2KO00418 725 aaKnown RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 KRT86O43790 486 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 NRDCO43847 1150 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 PALMO75781 387 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 KRT7P08729 469 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 EPHB2P29323 1055 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 CSKP41240 450 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 TNFRSF4P43489 277 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 RPS9P46781 194 aaKnown RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 GRSF1Q12849 480 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 DPYSL3Q14195 570 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 PLEKHG6Q3KR16 790 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 DGKKQ5KSL6 1271 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 Q6ZS52 159 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 RFX8Q6ZV50 586 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 TFAP2DQ7Z6R9 452 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 DAAM2Q86T65 1068 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 SETD3Q86TU7 594 aaPredicted RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 NT5DC3Q86UY8 548 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 KIAA2013Q8IYS2 634 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 WFIKKN2Q8TEU8 576 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 KRT35Q92764 455 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 FAF2Q96CS3 445 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 CSPG4P5Q96PW8 444 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 PSMB7Q99436 277 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 EPAS1Q99814 870 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 KLHL11Q9NVR0 708 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 KIAA1522Q9P206 1035 aaPredicted RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 GUCA1BQ9UMX6 200 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 MFHAS1Q9Y4C4 1052 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 PCDHGA2Q9Y5H1 932 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 SHROOM3Q8TF72 1996 aa13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
CHAF1A-202ENST00000585371 ZNF292O60281 2723 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 A0A0D9SEW6 157 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 TBC1D3BA6NDS4 549 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 DCLK1O15075 740 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 ERCC2P18074 760 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 AMPD1P23109 780 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 KDELR1P24390 212 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 GJC1P36383 396 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 ZNF135P52742 658 aaPredicted RBP13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 CDH6P55285 790 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 TPI1P60174 286 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 SLC12A1Q13621 1099 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 CDH18Q13634 790 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 PUM1Q14671 1186 aaKnown RBP eCLIP13.68□□□□□ -0.222e-8■■■□□ 16.8
CHAF1A-202ENST00000585371 TAZQ16635 292 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 FBXO43Q4G163 708 aa13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 PPP6R3Q5H9R7 873 aaPredicted RBP13.68□□□□□ -0.22
CHAF1A-202ENST00000585371 PITRM1Q5JRX3 1037 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms