RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ALPPL2P10696 532 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 P4HA1P13674 534 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DUSP3P51452 185 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ADPRHP54922 357 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SNRPFP62306 86 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CYP24A1Q07973 514 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CLN3Q13286 438 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TRIP4Q15650 581 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ISXQ2M1V0 245 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ZNF699Q32M78 642 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ZNF667Q5HYK9 610 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MPP7Q5T2T1 576 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MBLAC2Q68D91 279 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CLEC20AQ6ZU45 233 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ACOT1Q86TX2 421 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PTRH1Q86Y79 214 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DENND1CQ8IV53 801 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ARHGAP18Q8N392 663 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 GANCQ8TET4 914 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 FAM131CQ96AQ9 280 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MYO19Q96H55 970 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NEUROG2Q9H2A3 272 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MAGEF1Q9HAY2 307 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ABCB8Q9NUT2 735 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MARCH2Q9P0N8 246 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TBC1D7Q9P0N9 293 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RASAL2Q9UJF2 1139 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NUDT5Q9UKK9 219 aa7.46□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NYNRINQ9P2P1 1898 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 A0A1W2PNU3 283 aaPredicted RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TARSL2A2RTX5 802 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 MID1O15344 667 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 EIF3DO15371 548 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SLC7A4O43246 635 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 KLRC4O43908 158 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SIN3BO75182 1162 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PPFIA2O75334 1257 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 RNASEH2AO75792 299 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 GOT1P17174 413 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 POLR2EP19388 210 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 C5AR1P21730 350 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DGKAP23743 735 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 AP3M2P53677 418 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 OXCT1P55809 520 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ST8SIA6P61647 398 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 EFEMP1Q12805 493 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PNOCQ13519 176 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NCAPHQ15003 741 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 C3orf38Q5JPI3 329 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ZC3H3Q8IXZ2 948 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SLC25A45Q8N413 288 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ARL14Q8N4G2 192 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TPCN2Q8NHX9 752 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SSC4DQ8WTU2 575 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ERCC4Q92889 916 aaPredicted RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TTC17Q96AE7 1141 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SGF29Q96ES7 293 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 IFT43Q96FT9 208 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PRR11Q96HE9 360 aaPredicted RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TIGD1Q96MW7 591 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 OMDQ99983 421 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 C7orf25Q9BPX7 421 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 FGFBP2Q9BYJ0 223 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SLC25A18Q9H1K4 315 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CLSTN2Q9H4D0 955 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 KLHL11Q9NVR0 708 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NLGN3Q9NZ94 848 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NCKIPSDQ9NZQ3 722 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SATB2Q9UPW6 733 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 HBS1LQ9Y450 684 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ITIH6Q6UXX5 1313 aa7.45□□□□□ -1.22
CDK5RAP3-209ENST00000578663 LY6G6EA0A0G2JKS1 128 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PRAMEF26H0Y7S4 382 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SDC3O75056 442 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PHACTR2O75167 634 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 TCEA3O75764 348 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PIAS2O75928 621 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 AGFG2O95081 481 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CLDN1O95832 211 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 ITGA2BP08514 1039 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 GIMD1P0DJR0 217 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PRF1P14222 555 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 IDEP14735 1019 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 SLC8A1P32418 973 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CASRP41180 1078 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CD97P48960 835 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NDST1P52848 882 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PPP2CBP62714 309 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 PPP2CAP67775 309 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 AMPD3Q01432 767 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 INCA1Q0VD86 236 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 DPYDQ12882 1025 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NCOA4Q13772 614 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 NFKBIBQ15653 356 aa7.44□□□□□ -1.22
CDK5RAP3-209ENST00000578663 CAMK4Q16566 473 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms