RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 AZIN2Q96A70 460 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 MSANTD3Q96H12 275 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 MYO19Q96H55 970 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 XPO6Q96QU8 1125 aaKnown RBP8.14□□□□□ -1.11
CCDC40-215ENST00000576033 PSMB7Q99436 277 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 TUBB2BQ9BVA1 445 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 TPSD1Q9BZJ3 242 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 KLC2Q9H0B6 622 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 DHX35Q9H5Z1 703 aaKnown RBP8.14□□□□□ -1.11
CCDC40-215ENST00000576033 NOL6Q9H6R4 1146 aaKnown RBP8.14□□□□□ -1.11
CCDC40-215ENST00000576033 PRMT8Q9NR22 394 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-215ENST00000576033 ETNK2Q9NVF9 386 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 RRN3Q9NYV6 651 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 AP4E1Q9UPM8 1137 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 INVSQ9Y283 1065 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 MRPS17Q9Y2R5 130 aaKnown RBP8.14□□□□□ -1.11
CCDC40-215ENST00000576033 SCINQ9Y6U3 715 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 R4GN57 208 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 LAMA1P25391 3075 aa8.14□□□□□ -1.11
CCDC40-215ENST00000576033 IGLV3-10A0A075B6K4 115 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 A0A1B0GVM2 712 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 TCAF2A6NFQ2 919 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 DRGXA6NNA5 263 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 CHURC1-FNTBB4DL54 471 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 H0Y626 953 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 K7ERQ8 282 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 GALR2O43603 387 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 CASQ1P31415 396 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 SSR1P43307 286 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 MAGEA1P43355 309 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 RPS9P46781 194 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 FNTBP49356 437 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 MLLT6P55198 1093 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 SCAPQ12770 1279 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 MMRN1Q13201 1228 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 SEMA3BQ13214 749 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 LRRC32Q14392 662 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 DMC1Q14565 340 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 ZNF234Q14588 700 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 LLGL1Q15334 1064 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 ZNF569Q5MCW4 686 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 RNF219Q5W0B1 726 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 PAPD7Q5XG87 772 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 MBLAC2Q68D91 279 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 LINGO4Q6UY18 593 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 ARHGAP36Q6ZRI8 547 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 KIAA0907Q7Z7F0 614 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 SLFN11Q7Z7L1 901 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 KIAA1328Q86T90 577 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 NLRP14Q86W24 1093 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 C1orf210Q8IVY1 113 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 TXLNBQ8N3L3 684 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 RNF10Q8N5U6 811 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 RFFLQ8WZ73 363 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 NTAN1Q96AB6 310 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 ALG14Q96F25 216 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 TRIM11Q96F44 468 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 CELF6Q96J87 481 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 RPL10LQ96L21 214 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 MRGPRX3Q96LB0 322 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 NAPGQ99747 312 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 OSBPL6Q9BZF3 934 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 CD248Q9HCU0 757 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 OR12D3Q9UGF7 316 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 INTUQ9ULD6 942 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 SLC27A6Q9Y2P4 619 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 OR51B4Q9Y5P0 310 aa8.13□□□□□ -1.11
CCDC40-215ENST00000576033 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
CCDC40-215ENST00000576033 A0A1W2PQF6 199 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 TCRBV21S2A2A0A5A6 115 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 TTC34A8MYJ7 566 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 DCLK1O15075 740 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 BUB1BO60566 1050 aaPredicted RBP8.12□□□□□ -1.11
CCDC40-215ENST00000576033 PROSCO94903 275 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 SLU7O95391 586 aaKnown RBP8.12□□□□□ -1.11
CCDC40-215ENST00000576033 MT-CO1P00395 513 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 F9P00740 461 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 RHOCP08134 193 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 SP9P0CG40 484 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 RARAP10276 462 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 SLC2A3P11169 496 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 METAP1P53582 386 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 KIF5AQ12840 1032 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 TCEAL1Q15170 157 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 C5orf22Q49AR2 442 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 PPP6R3Q5H9R7 873 aaPredicted RBP8.12□□□□□ -1.11
CCDC40-215ENST00000576033 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 RABGAP1LQ5R372 815 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 ANO7Q6IWH7 933 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 CHPFQ8IZ52 775 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 FAM160A2Q8N612 972 aaPredicted RBP8.12□□□□□ -1.11
CCDC40-215ENST00000576033 NIPA2Q8N8Q9 360 aa8.12□□□□□ -1.11
CCDC40-215ENST00000576033 MDGA1Q8NFP4 955 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms