RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ABCB4P21439 1286 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 GPD1P21695 349 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 GLDCP23378 1020 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 SDC4P31431 198 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CASP14P31944 242 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 GBP1P32455 592 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 ADRA1BP35368 520 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 METAP1P53582 386 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CDH4P55283 916 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 SNX16P57768 344 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CDH18Q13634 790 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CA9Q16790 459 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CDO1Q16878 200 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 HNRNPA1L2Q32P51 320 aaKnown RBP8.93□□□□□ -0.98
SMG6-216ENST00000575176 FILIP1LQ4L180 1135 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 C9orf64Q5T6V5 341 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 TCEAL6Q6IPX3 200 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 DNAJC24Q6P3W2 148 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 PRR23BQ6ZRT6 265 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CPNE8Q86YQ8 564 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 PYROXD2Q8N2H3 581 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 MSANTD4Q8NCY6 345 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 RNF214Q8ND24 703 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 C1orf216Q8TAB5 229 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 FNIP1Q8TF40 1166 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 PTPRN2Q92932 1015 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 TCEAL3Q969E4 200 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 LOXL4Q96JB6 756 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 RPRD1AQ96P16 312 aaPredicted RBP8.93□□□□□ -0.98
SMG6-216ENST00000575176 FEM1AQ9BSK4 669 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 KLC2Q9H0B6 622 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 RSPH9Q9H1X1 276 aaPredicted RBP8.93□□□□□ -0.98
SMG6-216ENST00000575176 PDCL3Q9H2J4 239 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 WDCPQ9H6R7 721 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
SMG6-216ENST00000575176 TMEM74BQ9NUR3 256 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 PPARGC1AQ9UBK2 798 aaKnown RBP8.93□□□□□ -0.98
SMG6-216ENST00000575176 SLCO3A1Q9UIG8 710 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 ERVW-1Q9UQF0 538 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 HS3ST2Q9Y278 367 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 CHD8Q9HCK8 2581 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 FREM2Q5SZK8 3169 aa8.93□□□□□ -0.98
SMG6-216ENST00000575176 COL27A1Q8IZC6 1860 aaPredicted RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 BCLAF3A2AJT9 711 aaKnown RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 TTC34A8MYJ7 566 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 PATE3B3GLJ2 98 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 TIMM44O43615 452 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ATP9BO43861 1147 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SNAP91O60641 907 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 MFAP3LO75121 409 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SIN3BO75182 1162 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 LRCH4O75427 683 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 CLDN11O75508 207 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 MT-CO1P00395 513 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ASLP04424 464 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 IL1R2P27930 398 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 DRD3P35462 400 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 MPLP40238 635 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 TPMTP51580 245 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 RPS14P62263 151 aaKnown RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 ARF5P84085 180 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 KLHL30Q0D2K2 578 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 MTA1Q13330 715 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SLC12A1Q13621 1099 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 CCDC6Q16204 474 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 RABGAP1LQ5R372 815 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 TXNRD3NBQ6F5E7 133 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SERPINA13PQ6UXR4 307 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 TFAP2DQ7Z6R9 452 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 CACUL1Q86Y37 369 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ZNF557Q8N988 423 aaPredicted RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 DCAF4L2Q8NA75 395 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 OR2T3Q8NH03 318 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 FAM129BQ96TA1 746 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 DDX50Q9BQ39 737 aaKnown RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 CNPY3Q9BT09 278 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 NUP58Q9BVL2 599 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 PACSIN1Q9BY11 444 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SIK2Q9H0K1 926 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 RBSNQ9H1K0 784 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 OSBPL2Q9H1P3 480 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SEMA4GQ9NTN9 838 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 DLL3Q9NYJ7 618 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 WSB2Q9NYS7 404 aaPredicted RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 VPS51Q9UID3 782 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 FZD10Q9ULW2 581 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 PCDHGA5Q9Y5G8 931 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ACTL7AQ9Y615 435 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.92□□□□□ -0.98
SMG6-216ENST00000575176 ZZEF1O43149 2961 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ZFHX4Q86UP3 3567 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 SCN8AQ9UQD0 1980 aa8.92□□□□□ -0.98
SMG6-216ENST00000575176 ATXN2Q99700 1313 aaKnown RBP8.91□□□□□ -0.98
SMG6-216ENST00000575176 LNP1A1A4G5 178 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 TMCO5BA8MYB1 307 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 GOLGA6L19H0YKK7 550 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 K7ERQ8 282 aa8.91□□□□□ -0.98
SMG6-216ENST00000575176 SMAD6O43541 496 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms