RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 SPRP35270 261 aaPredicted RBP16.57■□□□□ 0.24
RAB40B-206ENST00000571995 CACNA2D1P54289 1103 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 TWF1Q12792 350 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 ART3Q13508 389 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 ARHGAP36Q6ZRI8 547 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 SLC26A9Q7LBE3 791 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 SHCBP1Q8NEM2 672 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 PYDC1Q8WXC3 89 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 ZNF778Q96MU6 729 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 COLEC11Q9BWP8 271 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 TRPV2Q9Y5S1 764 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 AK5Q9Y6K8 562 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 V9GYQ6 96 aa16.57■□□□□ 0.24
RAB40B-206ENST00000571995 GIPC1O14908 333 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ITGA2BP08514 1039 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 CDC42EP1Q00587 391 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 RAP1GAP2Q684P5 730 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 RPS27LQ71UM5 84 aaKnown RBP16.56■□□□□ 0.24
RAB40B-206ENST00000571995 KCNMB4Q86W47 210 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 UNC93AQ86WB7 457 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ATP6V1E2Q96A05 226 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 DENND2DQ9H6A0 471 aaPredicted RBP16.56■□□□□ 0.24
RAB40B-206ENST00000571995 TMEM216Q9P0N5 145 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 AFF4Q9UHB7 1163 aaKnown RBP16.56■□□□□ 0.24
RAB40B-206ENST00000571995 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 TEX264Q9Y6I9 313 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ATP6AP2A0A1C7CYW4 349 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ATP6AP2O75787 350 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 CCR1P32246 355 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 FCGRTP55899 365 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 IRF9Q00978 393 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ACAP1Q15027 740 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ZNF280DQ6N043 979 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 C16orf59Q7L2K0 433 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 SMARCD1Q96GM5 515 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 DDX50Q9BQ39 737 aaKnown RBP16.56■□□□□ 0.24
RAB40B-206ENST00000571995 KIAA1217Q5T5P2 1943 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 SMIM35A0A1B0GVV1 85 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 SPAG6O75602 509 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 STAMBPO95630 424 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 PROCP04070 461 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 CCND1P24385 295 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 LHX1P48742 406 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 PSMD5Q16401 504 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 TAF2Q6P1X5 1199 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 PACS1Q6VY07 963 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 TMEM110Q86TL2 294 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 SLC41A1Q8IVJ1 513 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 PIP4K2CQ8TBX8 421 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 URGCPQ8TCY9 931 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 FCRL2Q96LA5 508 aaPredicted RBP16.56■□□□□ 0.24
RAB40B-206ENST00000571995 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 SLC12A4Q9UP95 1085 aa16.56■□□□□ 0.24
RAB40B-206ENST00000571995 ITGB1P05556 798 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 PTPN4P29074 926 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 SCNN1BP51168 640 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 CDK16Q00536 496 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 KCNJ11Q14654 390 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 DRICH1Q6PGQ1 229 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 ST13P5Q8NFI4 369 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 KBTBD7Q8WVZ9 684 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 CERS2Q96G23 380 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 ARHGEF38Q9NXL2 777 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 EPHA3P29320 983 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 HIC1Q14526 733 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 KIF19Q2TAC6 998 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 RINLQ6ZS11 566 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 TAS2R42Q7RTR8 314 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 DENND6AQ8IWF6 608 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 GTF3C2Q8WUA4 911 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 KCTD4Q8WVF5 259 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 CATSPER2Q96P56 530 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 STARD7Q9NQZ5 370 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 GJD2Q9UKL4 321 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 ZBBXA8MT70 800 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 TYROBPO43914 113 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 ATP5HO75947 161 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 CDH5P33151 784 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 KHDC1Q4VXA5 237 aaKnown RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 RGMBQ6NW40 437 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 EP400NLQ6ZTU2 488 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 TAC4Q86UU9 113 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 UBR7Q8N806 425 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 HSFY1Q96LI6 401 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 LRRC40Q9H9A6 602 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 DMAP1Q9NPF5 467 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-206ENST00000571995 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
RAB40B-206ENST00000571995 PRKCGP05129 697 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 ITGB6P18564 788 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 PKNOX1P55347 436 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 HTRA3P83110 453 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 SH2D4BQ5SQS7 431 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 RNF43Q68DV7 783 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 DDIASQ8IXT1 998 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 SSX2IPQ9Y2D8 614 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 PLLPQ9Y342 182 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 ACTL7BQ9Y614 415 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms