RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 HAPLN3Q96S86 360 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 PSMB7Q99436 277 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 FEM1AQ9BSK4 669 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 TRIM7Q9C029 511 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 ITM2CQ9NQX7 267 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 USP36Q9P275 1121 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF212Q9UDV6 495 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 CAPN11Q9UMQ6 739 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 ADAMTS9Q9P2N4 1935 aa10.54□□□□□ -0.72
GTF3C1-213ENST00000571886 NYNRINQ9P2P1 1898 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 A0A0D9SEW6 157 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 A0A1W2PQJ5 194 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 MAP3K13O43283 966 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 SNAP91O60641 907 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 SIN3BO75182 1162 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF806P0C7X5 589 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 TPMTP51580 245 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 CDH4P55283 916 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 RPS14P62263 151 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ECT2LQ008S8 904 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF177Q13360 481 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 MAMLD1Q13495 774 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ELF2Q15723 593 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 RSPO4Q2I0M5 234 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 TTC39BQ5VTQ0 682 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 PLEKHA7Q6IQ23 1121 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 DNAJC24Q6P3W2 148 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 STRADAQ7RTN6 431 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 PYROXD2Q8N2H3 581 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ARFGAP1Q8N6T3 406 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ZNF557Q8N988 423 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 PIGKQ92643 395 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 PRCCQ92733 491 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 PTPRN2Q92932 1015 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 SIPA1Q96FS4 1042 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 NUP58Q9BVL2 599 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 NDFIP2Q9NV92 336 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 WSB2Q9NYS7 404 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 SUN2Q9UH99 717 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 NEU3Q9UQ49 428 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 TBC1D30Q9Y2I9 924 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ACTL7AQ9Y615 435 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 ATXN2Q99700 1313 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 SPTBN4Q9H254 2564 aa10.53□□□□□ -0.72
GTF3C1-213ENST00000571886 CHD5Q8TDI0 1954 aa10.52□□□□□ -0.72
GTF3C1-213ENST00000571886 ZBTB24O43167 697 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 LRP3O75074 770 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ZNF217O75362 1048 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 CLDN11O75508 207 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 MOCS3O95396 460 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 MT-CO1P00395 513 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ASLP04424 464 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 RHOCP08134 193 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 SRPRAP08240 638 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 C7P10643 843 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 GZMAP12544 262 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 GLDCP23378 1020 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ITPKAP23677 461 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 MAOBP27338 520 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 CASP14P31944 242 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ZNF143P52747 638 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ZBED6P86452 979 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 RPL6Q02878 288 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ZNF33AQ06730 810 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 SLC12A1Q13621 1099 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 HNRNPA1L2Q32P51 320 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 MANEALQ5VSG8 457 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 SCYL2Q6P3W7 929 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 LPCAT2Q7L5N7 544 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 FAM124AQ86V42 546 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 CCDC117Q8IWD4 279 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 STK40Q8N2I9 435 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 GPR161Q8N6U8 529 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 OR7D4Q8NG98 312 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 FRS2Q8WU20 508 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 TOE1Q96GM8 510 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 VCPIP1Q96JH7 1222 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 SPACA7Q96KW9 195 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 FAM129BQ96TA1 746 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 FSCN3Q9NQT6 498 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 OR12D3Q9UGF7 316 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ADAMTS1Q9UHI8 967 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 PCDHGA5Q9Y5G8 931 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 DOCK9Q9BZ29 2069 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 ITIH6Q6UXX5 1313 aa10.52□□□□□ -0.73
GTF3C1-213ENST00000571886 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 A0A087X0T9 212 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 K7ERQ8 282 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 RNF103O00237 685 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 RTN2O75298 545 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 LRIG2O94898 1065 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 IGLV3-19P01714 112 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 FAM228BP0C875 321 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 CD6P30203 668 aa10.51□□□□□ -0.73
GTF3C1-213ENST00000571886 ACSL1P33121 698 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms