RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHMP6-202ENST00000571457 ADIGQ0VDE8 80 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 BST2Q10589 180 aaKnown RBP11.73□□□□□ -0.53
CHMP6-202ENST00000571457 C1orf220Q5T0J3 134 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 FAM46CQ5VWP2 391 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 MSANTD2Q6P1R3 559 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 XKR5Q6UX68 686 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 BHLHA9Q7RTU4 235 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 TMC6Q7Z403 805 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 TRIM69Q86WT6 500 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 LURAP1LQ8IV03 231 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 STK40Q8N2I9 435 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 CARNMT1Q8N4J0 409 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 SLC4A11Q8NBS3 891 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 NDRG1Q92597 394 aaKnown RBP11.73□□□□□ -0.53
CHMP6-202ENST00000571457 SPAG5Q96R06 1193 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 KCTD10Q9H3F6 313 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 CISHQ9NSE2 258 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 HESX1Q9UBX0 185 aa11.73□□□□□ -0.53
CHMP6-202ENST00000571457 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
CHMP6-202ENST00000571457 GOLGA6L7A0A1B0GV03 622 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
CHMP6-202ENST00000571457 FFAR2O15552 330 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 CALUO43852 315 aaPredicted RBP11.72□□□□□ -0.53
CHMP6-202ENST00000571457 LZTS3O60299 673 aaPredicted RBP11.72□□□□□ -0.53
CHMP6-202ENST00000571457 IGLV3-27P01718 113 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 CASP1P29466 404 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 SLC6A4P31645 630 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
CHMP6-202ENST00000571457 AFMP43652 599 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 TBX4P57082 545 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 KCNMA1Q12791 1236 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 STK4Q13043 487 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 CUL4BQ13620 913 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 ISXQ2M1V0 245 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 PITRM1Q5JRX3 1037 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 KIAA1614Q5VZ46 1190 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 SCML4Q8N228 414 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 MAPK15Q8TD08 544 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 FAM131CQ96AQ9 280 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 SLC46A1Q96NT5 459 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
CHMP6-202ENST00000571457 TMEM8AQ9HCN3 771 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 CNGB3Q9NQW8 809 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 EXOC1Q9NV70 894 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 NLGN3Q9NZ94 848 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 NCKIPSDQ9NZQ3 722 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 TJP2Q9UDY2 1190 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 SLCO3A1Q9UIG8 710 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 NBASA2RRP1 2371 aa11.72□□□□□ -0.53
CHMP6-202ENST00000571457 TDRD6O60522 2096 aaKnown RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PLRG1O43660 514 aaKnown RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 RTN2O75298 545 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PIAS2O75928 621 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 TRIM49P0CI25 452 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 TRIM49CP0CI26 452 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 THEGLP0DJG4 465 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 SETSIPP0DME0 302 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PDIA4P13667 645 aaKnown RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 GTF2H1P32780 548 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 DRD3P35462 400 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 CTSOP43234 321 aaPredicted RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 RPS24P62847 133 aaKnown RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 SKOR1P84550 965 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 SULT2A1Q06520 285 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PPP3CAQ08209 521 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 NFATC3Q12968 1075 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 CUL4AQ13619 759 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 C3orf38Q5JPI3 329 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 KRT39Q6A163 491 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 SHC4Q6S5L8 630 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 ARL14Q8N4G2 192 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 KIAA0895Q8NCT3 520 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 KCTD13Q8WZ19 329 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 OR8D1Q8WZ84 308 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 TATDN2Q93075 761 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 IFT43Q96FT9 208 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 RPL10LQ96L21 214 aaKnown RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 APOLD1Q96LR9 279 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PRICKLE1Q96MT3 831 aaPredicted RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
CHMP6-202ENST00000571457 OSBPL2Q9H1P3 480 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PREBQ9HCU5 417 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 UCKL1Q9NWZ5 548 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 SATB2Q9UPW6 733 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 PCDHGA8Q9Y5G5 932 aa11.71□□□□□ -0.53
CHMP6-202ENST00000571457 TULP2O00295 520 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 SCAMP1O15126 338 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 LUC7L3O95232 432 aaKnown RBP11.7□□□□□ -0.54
CHMP6-202ENST00000571457 NR2F2P24468 414 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 DAOAP59103 153 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 CCDC15Q0P6D6 951 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 SLC12A1Q13621 1099 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 ARL13BQ3SXY8 428 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 C8orf34Q49A92 452 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms