RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 ACSL1P33121 698 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 CDH5P33151 784 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 NOS2P35228 1153 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 MATKP42679 507 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 CTSOP43234 321 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 OXCT1P55809 520 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 RNASE9P60153 205 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SHC2P98077 582 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 CENPCQ03188 943 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SFSWAPQ12872 951 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC12A1Q13621 1099 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 ARID5BQ14865 1188 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 FAM102AQ5T9C2 384 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 LRSAM1Q6UWE0 723 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SND1Q7KZF4 910 aaKnown RBP eCLIP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 OR2I1PQ8NGU4 316 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 C18orf8Q96DM3 657 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 MRGPRX3Q96LB0 322 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 STK33Q9BYT3 514 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 PABPC3Q9H361 631 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 MTG2Q9H4K7 406 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 C6orf106Q9H6K1 298 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 DNAAF2Q9NVR5 837 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 EIF2B4Q9UI10 523 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 TNRC6BQ9UPQ9 1833 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 NCKAP1Q9Y2A7 1128 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 CKAP5Q14008 2032 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 ITIH6Q6UXX5 1313 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 EDDM13A0A1B0GTR0 161 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 TTC34A8MYJ7 566 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 SCNN1AP37088 669 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 NNMTP40261 264 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 SULT1E1P49888 294 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 SULT2A1Q06520 285 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 FOXC1Q12948 553 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 AUHQ13825 339 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 KRT31Q15323 416 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 CST6Q15828 149 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 CDKAL1Q5VV42 579 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 FBXL22Q6P050 247 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 USP30Q70CQ3 517 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 NOP9Q86U38 636 aaKnown RBP12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 APCDD1Q8J025 514 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 EPS8L1Q8TE68 723 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 PPP1R9BQ96SB3 815 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 VPS16Q9H269 839 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 SGK2Q9HBY8 427 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 HS3ST4Q9Y661 456 aa12.74□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 FAM170AA1A519 330 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 PAGE1O75459 146 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 CLDN11O75508 207 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 FSBPO95073 299 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 CER1O95813 267 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 F9P00740 461 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 MZF1P28698 734 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 GABRB2P47870 512 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 PSMD8P48556 350 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 NUMBP49757 651 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 AFF3P51826 1226 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC14A1Q13336 389 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZNF177Q13360 481 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 TEAD4Q15561 434 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 STX1AQ16623 288 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 BRMS1LQ5PSV4 323 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 OTUD1Q5VV17 481 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 IL27RAQ6UWB1 636 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 XYLT1Q86Y38 959 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 MMAAQ8IVH4 418 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 IGSF8Q969P0 613 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 NPY6RQ99463 290 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 OMDQ99983 421 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 TKTL2Q9H0I9 626 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 SIK2Q9H0K1 926 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 GANQ9H2C0 597 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 WDCPQ9H6R7 721 aa12.73□□□□□ -0.37
CTDNEP1-205ENST00000570828 FAM207AQ9NSI2 230 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms