RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 GOT1P17174 413 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 EIF2DP41214 584 aaKnown RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 DGKGP49619 791 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 STARD6P59095 220 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 GNG11P61952 73 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 PRKCQQ04759 706 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 E2F5Q15329 346 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 LPAL2Q16609 132 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 CA9Q16790 459 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 C5orf22Q49AR2 442 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 FAM72AQ5TYM5 149 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 TXNRD3NBQ6F5E7 133 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 GRAMD4Q6IC98 578 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 FAM72DQ6L9T8 149 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 ZNF852Q6ZMS4 543 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 RFX8Q6ZV50 586 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 FAM72BQ86X60 149 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 KATNAL2Q8IYT4 538 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 EXD1Q8NHP7 514 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 RNF25Q96BH1 459 aaPredicted RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 MAGEB5Q9BZ81 275 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 PRDM16Q9HAZ2 1276 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 PCDH18Q9HCL0 1135 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 KLHL11Q9NVR0 708 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 MPP6Q9NZW5 540 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 TBC1D3BA6NDS4 549 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 OTOL1A6NHN0 477 aaPredicted RBP16.47■□□□□ 0.23
USB1-215ENST00000569252 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 FAM170BA6NMN3 283 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 USP27XA6NNY8 438 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 APODP05090 189 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 ZFXP17010 805 aaPredicted RBP16.47■□□□□ 0.23
USB1-215ENST00000569252 MAPKAPK2P49137 400 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 DNA2P51530 1060 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 COPS2P61201 443 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 GRSF1Q12849 480 aaKnown RBP eCLIP16.47■□□□□ 0.23
USB1-215ENST00000569252 SLC12A1Q13621 1099 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 MEI1Q5TIA1 1274 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
USB1-215ENST00000569252 TFAP2DQ7Z6R9 452 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 SETD3Q86TU7 594 aaPredicted RBP16.47■□□□□ 0.23
USB1-215ENST00000569252 ZNF354CQ86Y25 554 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 LZTR1Q8N653 840 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 CCDC26Q8TAB7 109 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 FIBINQ8TAL6 211 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 FAM3CQ92520 227 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 RAPGEF5Q92565 580 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 CD101Q93033 1021 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 PRICKLE1Q96MT3 831 aaPredicted RBP16.47■□□□□ 0.23
USB1-215ENST00000569252 P2RY13Q9BPV8 354 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 ZNF670Q9BS34 389 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 MUC3BQ9H195 1237 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 ARHGEF4Q9NR80 690 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 DLL3Q9NYJ7 618 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 CHD8Q9HCK8 2581 aa16.47■□□□□ 0.23
USB1-215ENST00000569252 MAP1BP46821 2468 aaKnown RBP16.46■□□□□ 0.23
USB1-215ENST00000569252 KMT2BQ9UMN6 2715 aaPredicted RBP16.46■□□□□ 0.23
USB1-215ENST00000569252 GFRA2O00451 464 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 CACNG3O60359 315 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 TULP3O75386 442 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 CNTN5O94779 1100 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 RHOCP08134 193 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 HOXD9P28356 352 aaPredicted RBP16.46■□□□□ 0.23
USB1-215ENST00000569252 HOXC13P31276 330 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 SERPINB6P35237 376 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 ETFBP38117 255 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 SLC6A11P48066 632 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 GALK1P51570 392 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 SGSHP51688 502 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 TFDP2Q14188 446 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 DPYSL3Q14195 570 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 PUM1Q14671 1186 aaKnown RBP eCLIP16.46■□□□□ 0.23
USB1-215ENST00000569252 ANKRD20A8PQ5CZ79 823 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 TPRG1Q6ZUI0 275 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 CIR1Q86X95 450 aaPredicted RBP16.46■□□□□ 0.23
USB1-215ENST00000569252 VSIG1Q86XK7 387 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 RFX6Q8HWS3 928 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 ZNF683Q8IZ20 524 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 KRT35Q92764 455 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 CSPG4P5Q96PW8 444 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 NELL2Q99435 816 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 LTB4R2Q9NPC1 389 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 TMEM248Q9NWD8 314 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 NCDNQ9UBB6 729 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 DNAI1Q9UI46 699 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
USB1-215ENST00000569252 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.23
USB1-215ENST00000569252 ZNF487B1APH4 448 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 TIMM44O43615 452 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 ERCC2P18074 760 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 DRD1P21728 446 aa16.45■□□□□ 0.22
USB1-215ENST00000569252 CTHP32929 405 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms