RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SULT1E1P49888 294 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 VASPP50552 380 aaPredicted RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 NOVA1P51513 510 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 GSCP56915 257 aaPredicted RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 POLR2FP61218 127 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 GRIK2Q13002 908 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 MTA1Q13330 715 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SLC12A1Q13621 1099 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SLC25A52Q3SY17 297 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 RAB6CQ53S08 254 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 ALFQ53S48 1182 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 RABGAP1LQ5R372 815 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 N4BP2L1Q5TBK1 243 aaPredicted RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 SH3PXD2AQ5TCZ1 1133 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 DCAF12L1Q5VU92 463 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 DAB2IPQ5VWQ8 1189 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SASS6Q6UVJ0 657 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 RABEPKQ7Z6M1 372 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 FAM124AQ86V42 546 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 DHX40Q8IX18 779 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 ZCCHC9Q8N567 271 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 MINDY1Q8N5J2 469 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 AADATQ8N5Z0 425 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 FRS2Q8WU20 508 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 CPA5Q8WXQ8 436 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 PTPRN2Q92932 1015 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 RPRD1AQ96P16 312 aaPredicted RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 PCDHB18PQ96TA0 734 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 PSMB7Q99436 277 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 BPIFA3Q9BQP9 254 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SYT11Q9BT88 431 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 FUCA2Q9BTY2 467 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 NUP58Q9BVL2 599 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 TKTL2Q9H0I9 626 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 RAB6CQ9H0N0 254 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 PABPC3Q9H361 631 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 NLRC4Q9NPP4 1024 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 METTL5Q9NRN9 209 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 DNAAF2Q9NVR5 837 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 RRN3Q9NYV6 651 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SUSD2Q9UGT4 822 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SLCO3A1Q9UIG8 710 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 STAP1Q9ULZ2 295 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 NEU3Q9UQ49 428 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 TBC1D30Q9Y2I9 924 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 SNX10Q9Y5X0 201 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 TMEM131Q92545 1883 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 EDDM13A0A1B0GTR0 161 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 A0A1B0GTW7 788 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 TCRBV5S1A1TA0A578 114 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 TARSL2A2RTX5 802 aaKnown RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 DRGXA6NNA5 263 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 MEI4A8MW99 385 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 GOLGA6L22H0YM25 854 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 GOLGA8SH3BPF8 625 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 ARHGAP33O14559 1287 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 MID1O15344 667 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 ATP9BO43861 1147 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 CLDN11O75508 207 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 ENDOD1O94919 500 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 SEMA4FO95754 770 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 DNTTP04053 509 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 CD59P13987 128 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 RDXP35241 583 aaKnown RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 DRD3P35462 400 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 METAP1P53582 386 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 SNX16P57768 344 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 RNASE9P60153 205 aaKnown RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 ST8SIA6P61647 398 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 SHC2P98077 582 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 GFPT1Q06210 699 aaPredicted RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 ELAVL3Q14576 367 aaKnown RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 CST6Q15828 149 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 TTC31Q49AM3 519 aaPredicted RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 WDR45BQ5MNZ6 344 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 FKBP15Q5T1M5 1219 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 SYCP2LQ5T4T6 812 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 MANEALQ5VSG8 457 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 USP30Q70CQ3 517 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 MON1BQ7L1V2 547 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 ERICH1Q86X53 443 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 AOPEPQ8N6M6 819 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 EMC1Q8N766 993 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 JOSD2Q8TAC2 188 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 BAP1Q92560 729 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 BIRC7Q96CA5 298 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 RPL10LQ96L21 214 aaKnown RBP8.05□□□□□ -1.12
CDH3-209ENST00000569080 CFAP57Q96MR6 1250 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 FAM129BQ96TA1 746 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 C11orf70Q9BRQ4 267 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 FEM1AQ9BSK4 669 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 PDCL3Q9H2J4 239 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 SUN2Q9UH99 717 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 ADAMTS1Q9UHI8 967 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 SLC12A6Q9UHW9 1150 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 HS3ST2Q9Y278 367 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 DMXL2Q8TDJ6 3036 aa8.05□□□□□ -1.12
CDH3-209ENST00000569080 PCNX2A6NKB5 2137 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms