RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 UBXN6Q9BZV1 441 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ETNK2Q9NVF9 386 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 KCNU1A8MYU2 1149 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 TTC4O95801 387 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 POLBP06746 335 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SCNN1BP51168 640 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ZNF252P-AS1Q0IIN9 211 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 EML3Q32P44 896 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 GKAP1Q5VSY0 366 aaPredicted RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ARL14EPQ8N8R7 260 aaPredicted RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SLC43A3Q8NBI5 491 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 LINC01599Q8WXQ3 324 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 NKD2Q969F2 451 aaPredicted RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ATP6V1E2Q96A05 226 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 P2RY11Q96G91 374 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SCML2Q9UQR0 700 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SDR42E2A6NKP2 422 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 E9PAM4 449 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 PSMB4P28070 264 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 CDC25CP30307 473 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 CORO1AP31146 461 aaKnown RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 MAGEA11P43364 429 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 CACNA2D1P54289 1103 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 IL9RQ01113 521 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 IFT88Q13099 833 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 FAM171BQ6P995 826 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 LINC00523Q86TU6 105 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 HDAC11Q96DB2 347 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 PPP1R2P1Q96PQ5 205 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 TRHDEQ9UKU6 1024 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 UBA6A0AVT1 1052 aaPredicted RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 TMEM189-UBE2V1I3L0A0 370 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 SASH3O75995 380 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 KCNA4P22459 653 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 ALDH3A1P30838 453 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 ELK3P41970 407 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 EPS8L3Q8TE67 593 aaKnown RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 FICDQ9BVA6 458 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 CNOT10Q9H9A5 744 aaKnown RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 TPH1P17752 444 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 ST8SIA6P61647 398 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 MFN1Q8IWA4 741 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 ASIC4Q96FT7 647 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 FAM47DPA6NHR8 397 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 DGKIO75912 1065 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 CCNB1P14635 433 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 NKX3-2P78367 333 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 TMPRSS15P98073 1019 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 TRIP4Q15650 581 aaPredicted RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 GPR158Q5T848 1215 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 ZNF572Q7Z3I7 529 aaPredicted RBP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 HIPK4Q8NE63 616 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 POF1BQ8WVV4 589 aa12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.43□□□□□ -0.42
TMEM170A-205ENST00000568559 NR1H3Q13133 447 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 XRCC4Q13426 336 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 AUHQ13825 339 aaKnown RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 C12orf50Q8NA57 414 aaPredicted RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 ART4Q93070 314 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 VAT1Q99536 393 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 GKN1Q9NS71 199 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 C20orf96Q9NUD7 363 aaPredicted RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 ZNF446Q9NWS9 450 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 BAIAP2L1Q9UHR4 511 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 TBX21Q9UL17 535 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 TRIP12Q14669 1992 aaPredicted RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 COPEO14579 308 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 TBL1XO60907 577 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 SPAG6O75602 509 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 IGFBP4P22692 258 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 SSTR1P30872 391 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 CHKAP35790 457 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 RHOAP61586 193 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 PPP2R2AP63151 447 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 GPM6BQ13491 265 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 RPS6KA2Q15349 733 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 PARP6Q2NL67 630 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 FAM133BQ5BKY9 247 aaKnown RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 FYB2Q5VWT5 728 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 PAQR9Q6ZVX9 377 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 ZCCHC9Q8N567 271 aaKnown RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 EIF1ADQ8N9N8 165 aaKnown RBP12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 ZMIZ2Q8NF64 920 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 LRRC8CQ8TDW0 803 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 PLK2Q9NYY3 685 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 DCTN4Q9UJW0 460 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 WDR27A2RRH5 827 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 A8MX80 341 aa12.42□□□□□ -0.42
TMEM170A-205ENST00000568559 RIPK2O43353 540 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms