RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PGAP3Q96FM1 320 aaPredicted RBP14.88□□□□□ -0.03
CMTM3-215ENST00000568477 TBCBQ99426 244 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 BTBD1Q9H0C5 482 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 TKTL2Q9H0I9 626 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 SIK2Q9H0K1 926 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 WDCPQ9H6R7 721 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 SCML1Q9UN30 329 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 EPG5Q9HCE0 2579 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 ITIH6Q6UXX5 1313 aa14.88□□□□□ -0.03
CMTM3-215ENST00000568477 KNL1Q8NG31 2342 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 TARSL2A2RTX5 802 aaKnown RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 TTC34A8MYJ7 566 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 OPHN1O60890 802 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 CLDN11O75508 207 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ADCY5O95622 1261 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 SEMA4FO95754 770 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ZNF18P17022 549 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 MZF1P28698 734 aaPredicted RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ACSL1P33121 698 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 FLT3P36888 993 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 IRAK1P51617 712 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 PLK1P53350 603 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 UBXN1Q04323 297 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 TYRO3Q06418 890 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 SFSWAPQ12872 951 aaKnown RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ZNF177Q13360 481 aaPredicted RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 C2CD6Q53TS8 623 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 C9orf64Q5T6V5 341 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 TRIM72Q6ZMU5 477 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 MINDY1Q8N5J2 469 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 GANCQ8TET4 914 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 SNX19Q92543 992 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 RPL10LQ96L21 214 aaKnown RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ADAM33Q9BZ11 813 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ZDHHC5Q9C0B5 715 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
CMTM3-215ENST00000568477 SGK2Q9HBY8 427 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 ARHGEF38Q9NXL2 777 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 SLCO3A1Q9UIG8 710 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 NCKAP1Q9Y2A7 1128 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 PCDH15Q96QU1 1955 aa14.87□□□□□ -0.03
CMTM3-215ENST00000568477 GIPC1O14908 333 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 BCAT2O15382 392 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 CYP1A1P04798 512 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 CEACAM1P13688 526 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 CHRNB2P17787 502 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 NUMBP49757 651 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 STK19P49842 368 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 FMO1Q01740 532 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 NCAPHQ15003 741 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 CST6Q15828 149 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 C5orf22Q49AR2 442 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 USP30Q70CQ3 517 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 C14orf80Q86SX3 495 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 AOPEPQ8N6M6 819 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 DEFB124Q8NES8 71 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 FUCA2Q9BTY2 467 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 NAT10Q9H0A0 1025 aaKnown RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 RBSNQ9H1K0 784 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 SLC32A1Q9H598 525 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 C6orf106Q9H6K1 298 aaPredicted RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 FBXL12Q9NXK8 326 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 EIF2B4Q9UI10 523 aaKnown RBP14.86□□□□□ -0.03
CMTM3-215ENST00000568477 SLC25A13Q9UJS0 675 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 TMEM59LQ9UK28 342 aa14.86□□□□□ -0.03
CMTM3-215ENST00000568477 LRRC10BA6NIK2 292 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 UPK3BL1B0FP48 263 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 UPK3BL2E5RIL1 263 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 MID1O15344 667 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 MMP8P22894 467 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 PMLP29590 882 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 RDXP35241 583 aaKnown RBP14.85□□□□□ -0.03
CMTM3-215ENST00000568477 CDH4P55283 916 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ZNF252P-AS1Q0IIN9 211 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 GRIK2Q13002 908 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 SEMA3BQ13214 749 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 LRRC31Q6UY01 552 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ARCQ7LC44 396 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 MMAAQ8IVH4 418 aaKnown RBP14.85□□□□□ -0.03
CMTM3-215ENST00000568477 STK40Q8N2I9 435 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 OR2I1PQ8NGU4 316 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ALG14Q96F25 216 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 CFAP57Q96MR6 1250 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ERGIC2Q96RQ1 377 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 C11orf70Q9BRQ4 267 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 FEM1AQ9BSK4 669 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ANLNQ9NQW6 1124 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 METTL5Q9NRN9 209 aaKnown RBP14.85□□□□□ -0.03
CMTM3-215ENST00000568477 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
CMTM3-215ENST00000568477 VPS28Q9UK41 221 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ANGPTL2Q9UKU9 493 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 TBC1D30Q9Y2I9 924 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.85□□□□□ -0.03
CMTM3-215ENST00000568477 SNX10Q9Y5X0 201 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 ADAMTS9Q9P2N4 1935 aa14.85□□□□□ -0.03
CMTM3-215ENST00000568477 I6L893 689 aaPredicted RBP14.84□□□□□ -0.03
CMTM3-215ENST00000568477 CNTN5O94779 1100 aa14.84□□□□□ -0.03
CMTM3-215ENST00000568477 FSBPO95073 299 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms