RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PPWD1Q96BP3 646 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 SLC45A3Q96JT2 553 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 KCNK16Q96T55 309 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 SORT1Q99523 831 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PRPF18Q99633 342 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF670Q9BS34 389 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 BFARQ9NZS9 450 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 CITO14578 2027 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 LAMA3Q16787 3333 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 H3BRB1 525 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 TRDMT1O14717 391 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MAGEC1O60732 1142 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MT-CYBP00156 380 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 C2P06681 752 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 USP17L7P0C7H9 530 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 XRCC1P18887 633 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PROZP22891 400 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 RAB27AP51159 221 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ITKQ08881 620 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 WASHC5Q12768 1159 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PDK3Q15120 406 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 SLC9A4Q6AI14 798 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 LDB1Q86U70 411 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 RIOX2Q8IUF8 465 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 DENND6AQ8IWF6 608 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 BHLHE22Q8NFJ8 381 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 PHF21BQ96EK2 531 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 FERMT1Q9BQL6 677 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 CENPKQ9BS16 269 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 TUT1Q9H6E5 874 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MTMR10Q9NXD2 777 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 GJD2Q9UKL4 321 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 TTC24A2A3L6 582 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 BUD23O43709 281 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 KLHL2O95198 593 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 FESP07332 822 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 VCLP18206 1134 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 NFKB1P19838 968 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 RPL10P27635 214 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 NMBRP28336 390 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ETFBP38117 255 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 THOP1P52888 689 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ZNF280AP59817 542 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 FOLH1Q04609 750 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 KLF10Q13118 480 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 DGKDQ16760 1214 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 APOBEC3FQ8IUX4 373 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ABTB1Q969K4 478 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 CMTM5Q96DZ9 223 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MPP4Q96JB8 637 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 QKIQ96PU8 341 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 GATA5Q9BWX5 397 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 TRIM8Q9BZR9 551 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 CYP3A43Q9HB55 503 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 RHBDL2Q9NX52 303 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 FETUBQ9UGM5 382 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 ARHGAP26Q9UNA1 814 aa9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 RUVBL2Q9Y230 463 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-206ENST00000568294 C15orf38-AP3S2A0A0A6YYH1 394 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 SNNO75324 88 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 CTSHP09668 335 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 MCF2P10911 925 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 ERCC2P18074 760 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 PGAM1P18669 254 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 CPOXP36551 454 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GP5P40197 560 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GRIA2P42262 883 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GRIA4P48058 902 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 RAP1GDS1P52306 607 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 ROR2Q01974 943 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 MPP3Q13368 585 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 MSLNQ13421 630 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 LBRQ14739 615 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GRM3Q14832 879 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 TAZQ16635 292 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GK5Q6ZS86 529 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 ARPINQ7Z6K5 226 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 KCNMB4Q86W47 210 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 BEST2Q8NFU1 509 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 RAB3IL1Q8TBN0 382 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GATA6Q92908 595 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 SLC39A3Q9BRY0 314 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 PCDHAC1Q9H158 963 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 PIGVQ9NUD9 493 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 IRAK4Q9NWZ3 460 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 GMPR2Q9P2T1 348 aaKnown RBP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 DYNC1LI2O43237 492 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 DNAJA2O60884 412 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 VAPBO95292 243 aa9.15□□□□□ -0.94
HDGFL3-206ENST00000568294 ALDH1A3P47895 512 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms