RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PSMB4P28070 264 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 SLC7A2P52569 658 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 GOLGA7BQ2TAP0 167 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 DRICH1Q6PGQ1 229 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 DHRSXQ8N5I4 330 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 PLD5Q8N7P1 536 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 UBR7Q8N806 425 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 PCYOX1LQ8NBM8 494 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 BORCS5Q969J3 196 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 NCLNQ969V3 563 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 GATA5Q9BWX5 397 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 OSBPL11Q9BXB4 747 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 FRMD8P1Q9BZ68 369 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 EBF1Q9UH73 591 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CROTQ9UKG9 612 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 TELO2Q9Y4R8 837 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 IGKV6D-41A0A0C4DH26 115 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 CCNT2O60583 730 aaKnown RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 C4BPAP04003 597 aaKnown RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 C2P06681 752 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 MYL4P12829 197 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 FASP25445 335 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 TMEM26Q6ZUK4 368 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 CCDC60Q8IWA6 550 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 C12orf56Q8IXR9 622 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 ADGRF2Q8IZF7 708 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 AHI1Q8N157 1196 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 GMCL1P1Q8NEA9 526 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 FNDC8Q8TC99 324 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 HTR3CQ8WXA8 447 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 ATAD3AQ9NVI7 634 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 DDX43Q9NXZ2 648 aaKnown RBP11.12□□□□□ -0.63
PALB2-206ENST00000568219 PSAT1Q9Y617 370 aa11.12□□□□□ -0.63
PALB2-206ENST00000568219 RBM47A0AV96 593 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 CAPN14A8MX76 684 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 RNF103O00237 685 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 MICAL2O94851 1124 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 PTPN1P18031 435 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 CDH2P19022 906 aaPredicted RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 LRPAP1P30533 357 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 PRKAA1Q13131 559 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 OLIG2Q13516 323 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 STILQ15468 1287 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 ANKDD1AQ495B1 522 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 C6orf10Q5SRN2 563 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 CCDC103Q8IW40 242 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 RP9Q8TA86 221 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 KCTD4Q8WVF5 259 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 C12orf43Q96C57 262 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 MASTLQ96GX5 879 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 COL20A1Q9P218 1284 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 TMEM247A6NEH6 219 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 DEAF1O75398 565 aaPredicted RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 BAIAP3O94812 1187 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 ERBB2P04626 1255 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 HDCP19113 662 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 CNTFP26441 200 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 CDKL1Q00532 357 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 NOMO1Q15155 1222 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 PCSK7Q16549 785 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SP8Q8IXZ3 490 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
PALB2-206ENST00000568219 URGCPQ8TCY9 931 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 ELMO1Q92556 727 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 HPDLQ96IR7 371 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 VPS39Q96JC1 886 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 RNF145Q96MT1 663 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 DNAI2Q9GZS0 605 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SUN2Q9UH99 717 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 ACOT9Q9Y305 439 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 PDE4DIPQ5VU43 2346 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 MATN2O00339 956 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 BUD23O43709 281 aaKnown RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 ZBTB14O43829 449 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 MFN2O95140 757 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 VNN1O95497 513 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 ZNF182P17025 639 aaPredicted RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 STAT5BP51692 787 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 POU6F1Q14863 301 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SURF1Q15526 300 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 STK32CQ86UX6 486 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SPPL2CQ8IUH8 684 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 TUBGCP3Q96CW5 907 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 B3GNT5Q9BYG0 378 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 C1orf21Q9H246 121 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 SYBUQ9NX95 663 aa11.11□□□□□ -0.63
PALB2-206ENST00000568219 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.11□□□□□ -0.63
PALB2-206ENST00000568219 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms