RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 CEP63Q96MT8 703 aa23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 PRMT1Q99873 361 aaKnown RBP23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 ARHGAP20Q9P2F6 1191 aa23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 SARDHQ9UL12 918 aa23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 CNTN6Q9UQ52 1028 aa23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 GCN1Q92616 2671 aaKnown RBP23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 PTPRQQ9UMZ3 2332 aa23.67■■□□□ 1.38
CNEP1R1-209ENST00000567712 SMC2O95347 1197 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 LDOC1O95751 146 aaPredicted RBP23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 TRUB2O95900 331 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 ITGAVP06756 1048 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 C5AR1P21730 350 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 ACADVLP49748 655 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 GCNT1Q02742 428 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 SND1Q7KZF4 910 aaKnown RBP eCLIP23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 KANSL1Q7Z3B3 1105 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 OR52K2Q8NGK3 314 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 DHTKD1Q96HY7 919 aaPredicted RBP23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 SERAC1Q96JX3 654 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 CEP83Q9Y592 693 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 PCDHGA1Q9Y5H4 931 aa23.66■■□□□ 1.38
CNEP1R1-209ENST00000567712 PPP1R3GB7ZBB8 358 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 E5RJQ4 531 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 TLX3O43711 291 aaPredicted RBP23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 IL1BP01584 269 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 PDGFRAP16234 1089 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 ABCB4P21439 1286 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 ITPKBP27987 946 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 EPHA8P29322 1005 aaPredicted RBP23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 IRAK1P51617 712 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 NXPH1P58417 271 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 INAVAQ3KP66 663 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 KLHL10Q6JEL2 608 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 FRS2Q8WU20 508 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 TSC1Q92574 1164 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 FAM131CQ96AQ9 280 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 DCBLD2Q96PD2 775 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 CAAP1Q9H8G2 361 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 GDF3Q9NR23 364 aa23.65■■□□□ 1.38
CNEP1R1-209ENST00000567712 TLR4O00206 839 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 PSMA7O14818 248 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 P4HA2O15460 535 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 LATO43561 262 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 RTN2O75298 545 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 MOCS3O95396 460 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 KCNH2Q12809 1159 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 CXorf57Q6NSI4 855 aaKnown RBP23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 BEND5Q7L4P6 421 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 CCAR2Q8N163 923 aaKnown RBP23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 ALG14Q96F25 216 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 BTN2A3PQ96KV6 586 aa23.64■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3DA0A087WVF3 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3IA0A087WXS9 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3EA0A087X179 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3KA0A087X1G2 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3FA6NER0 549 aaPredicted RBP23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 KCNU1A8MYU2 1149 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3LB9A6J9 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 CAPN9O14815 690 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 RFPL3O75679 317 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 ADH1BP00325 375 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 APOEP02649 317 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3HP0C7X1 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 KRT5P13647 590 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 JUPP14923 745 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 MAT2AP31153 395 aaKnown RBP23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 RNF219Q5W0B1 726 aaPredicted RBP23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3GQ6DHY5 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3CQ6IPX1 549 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TMEM110Q86TL2 294 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 CCDC117Q8IWD4 279 aaPredicted RBP23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TRIM59Q8IWR1 403 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 TBC1D3Q8IZP1 549 aaPredicted RBP23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 NELFBQ8WX92 580 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 ZNF606Q8WXB4 792 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 INTS2Q9H0H0 1204 aaKnown RBP23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 POPDC2Q9HBU9 364 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 CA5BQ9Y2D0 317 aa23.63■■□□□ 1.37
CNEP1R1-209ENST00000567712 LETM1O95202 739 aaPredicted RBP23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 ACADSBP45954 432 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 CENPCQ03188 943 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 SFSWAPQ12872 951 aaKnown RBP23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 TARDBPQ13148 414 aaKnown RBP eCLIP23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 ELAVL3Q14576 367 aaKnown RBP23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 POM121L1PQ3SYA9 428 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 HES3Q5TGS1 186 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 SFMBT2Q5VUG0 894 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 FBXL19Q6PCT2 694 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 GJB7Q6PEY0 223 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 WDTC1Q8N5D0 677 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 PIP4K2CQ8TBX8 421 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 STK32AQ8WU08 396 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 SKA1Q96BD8 255 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 TIGD1Q96MW7 591 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 CTNND2Q9UQB3 1225 aa23.62■■□□□ 1.37
CNEP1R1-209ENST00000567712 E9PAM4 449 aa23.61■■□□□ 1.37
CNEP1R1-209ENST00000567712 F5H5T6 163 aa23.61■■□□□ 1.37
CNEP1R1-209ENST00000567712 SART1O43290 800 aaKnown RBP23.61■■□□□ 1.37
CNEP1R1-209ENST00000567712 RXRGP48443 463 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms